Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1197 ATGAACCAAAATGTTTCTAACAACTCAACTTCGACCAACAACAACCCATCTCCACCCAATTCCCCTTCACACACACCGAATGAAATTATTATCGGTGAGGGTTTTGAAACAATTGCAAAAACCTCTGAAGTGGTTTTGGCAGCTGAATTGAACGCTGTCAATGATGAGACCAATGAAAACGACATTGGTGGCGCTAATGAAGATGGCGGGGCCCAAGGTGGGGTTCCTAGGTCTATGTTTGTTGCTTTGATTGGTGATGGTTCGAATACATCTATGGTCGAGCAAGTTGGTGGCGATAATCATGTCCAACCTTTTAAGAAGAGAAAGTACAAACTAGTTAGAGACCCTCCTATTGGAATACCTACTTGTCCAGTATGCAAGAAGGAGTTTGCAACATGGAGAGCTGCATTTGGGCATATGAACAAGCATCCCGATCGTCCTTACCGTGGATTCTTTCCTCCTCCTACTTTTACCCCCACTGCATCAGTGGCTGGGATCCATGTTGAGGACGATTGTCATCCTAAAGAGGTGGATGATGAAGGGGTGTTAGCGGTGGTTCGCGAACTTATCGTTGACCTGAATAGGTCTAGGTCTATTGAAGTGCCAGCTAAGTCCTCCGCTGCTGGTGGCAGTGGGAGAAATGAAGAAGTACCTGCCCTGGCACCTGAATATGAAGAGGGAAGAAGGAAAAATGTGTTTGACTTGAATGAGTTGCCTCCGAATGATGATGATGATGATGATGACAAAACTGAAGAGAAATGA 762 0.4514 MNQNVSNNSTSTNNNPSPPNSPSHTPNEIIIGEGFETIAKTSEVVLAAELNAVNDETNENDIGGANEDGGAQGGVPRSMFVALIGDGSNTSMVEQVGGDNHVQPFKKRKYKLVRDPPIGIPTCPVCKKEFATWRAAFGHMNKHPDRPYRGFFPPPTFTPTASVAGIHVEDDCHPKEVDDEGVLAVVRELIVDLNRSRSIEVPAKSSAAGGSGRNEEVPALAPEYEEGRRKNVFDLNELPPNDDDDDDDKTEEK* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1197 253 MobiDBLite consensus disorder prediction 202 253 - -
Tpr2g1197 253 MobiDBLite consensus disorder prediction 219 237 - -
Tpr2g1197 253 MobiDBLite consensus disorder prediction 238 253 - -
Tpr2g1197 253 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 94 251 - -
Tpr2g1197 253 MobiDBLite consensus disorder prediction 1 23 - -
Tpr2g1197 253 MobiDBLite consensus disorder prediction 1 18 - -
Tpr2g1197 253 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 94 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1197 Tpr-Chr2 14032662 14034056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1197 102 155 C2H2 Transcription Factor Family AT2G26940 42.593 3.33e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g1197 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1197 - K15196 mtr:MTR_5g023910 151.754