Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1195 ATGGAAGAAGATTCCCTGAAAATCGCTCTTGAAGTGTTGGAAGAGCTGAAAATGGGCAAGAACGAGATTGGCCGTGGAGATTCAAAGGTTGTGGTGGCAAATAGTTCGATGGTGGAGGTGATGGGAGGAGTTCTAAACAACGGTCAATCTATAAAGAAGAAAAAGAATAACATTGAAGTGAAAGACATTTATCCCTTGAAATATCCAATCTGCCCTAAGTGTAAAGGAGAGTTTTTCACATTTAGTGCTGTAATTGAACACTTGCTAAAAAACCCTAATTGTGCTTCTTGTGGTACCTCTAACCCACATCAACTTGTTGATCTTAACAAGGGTGCTGATGAGGTCCAGCAAATGGAGATAGAGGGGTCCTCTAATGCTGCTGCTGCACCCAAGCCTGCTGAATGTTTTGTAGGAAAGAAAAAGAGGGCAACAAGGGACCATGTTGCAAAAATTACTGTATCGGATTTGGTCAAGTACTTTGATATGCCACTTTTAGAAGCCTCAAAGAAACTAAATGTTGGCACTACTGTTCTCAAAAGAAGGTGCAGAGAATTGGGTCTTCCCCGCTGGCCTCACAGGAAGATCAAATCACTTGATACTCTCATTCATGATCTTCAGGAAGAGGCAGCACATAAGGAAATGAAGAATAAAGCTGCAGCAATGGCAGTGAGAAAGAAGCAAAAGATGGTGGAAAGTGAAAAAGAAAGGATAGAGAAGAAGCCATTCATTGCCATCAAAAGTGAGACCAGGAGATTGAGACAATATGTTTTCAAGAGAAGGTACCATGCTAGAGTTATGGAAAAACAGAATTAG 813 0.4108 MEEDSLKIALEVLEELKMGKNEIGRGDSKVVVANSSMVEVMGGVLNNGQSIKKKKNNIEVKDIYPLKYPICPKCKGEFFTFSAVIEHLLKNPNCASCGTSNPHQLVDLNKGADEVQQMEIEGSSNAAAAPKPAECFVGKKKRATRDHVAKITVSDLVKYFDMPLLEASKKLNVGTTVLKRRCRELGLPRWPHRKIKSLDTLIHDLQEEAAHKEMKNKAAAMAVRKKQKMVESEKERIEKKPFIAIKSETRRLRQYVFKRRYHARVMEKQN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1195 270 PANTHER PROTEIN RKD4 91 269 IPR044607 GO:0003700
Tpr2g1195 270 Coils Coil 195 215 - -
Tpr2g1195 270 Pfam RWP-RK domain 150 198 IPR003035 -
Tpr2g1195 270 ProSiteProfiles RWP-RK domain profile. 133 218 IPR003035 -
Tpr2g1195 270 PANTHER PROTEIN RKD5 91 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1195 Tpr-Chr2 14018727 14021429 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1195 137 263 AtRKD Transcription Factor Family AT4G35590 57.480 5.26e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr2g1195 RWP-RK 8.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1195 - - gmx:100306328 193.741