Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1188 ATGAAGGTTTCTGAGGACAAGAGTTATAATAACTCTAACTCAATTAACCCCACAAATTTTCAAGGAGGGTTAGATTCTAGAAAGATTGGGCAAAACAGAAGAGTGTTGGGAGTGATTAATCAGAATCTTGTTATGGAAGGGAGACCATATCCATGTGTTGTTAACAAAAGAGCATTGTCAGAAAGAAATGAGGTTTGTGAGAAGAAACAAGCGGATCCGGGGCATCGACCCATTACTAGGAGGTTTGCTGCAAAAGTTGTTGCTGACACAAAAAAATCTAATGCTGAGGGAACTACCAAAAGGTCAAATTTGGGAAATTCAAATGGATTTGCAGATAGTATATTTGTTGACGATGAACACAAGCCAGCGGAAGATCAACCAGTGCCAATGGCTTTAGAGCAAATAGAAGAACCAACGCTTGTTGGATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATGGAAGAGCCTGTTTTGGATATTGACACCTGTGATGCAGATAACCCTCTTGCGGTTACCGAATATATTGAAGATCTTTATTCTTTCTATAGAAAAGTTGAGAGTACTGGCTGTGTCTCACCAAATTATATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCCATACTCATTGACTGGCTTATTGAGGTGCACGACAAATTCGACCTCGTGCATGAGACACTGTTTCTTACAGTTAATCTAATAGACAGATTCTTGGAAAAGCAATCAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTGGCAATGCTTTTGGCATGTAAGTATGAGGAAGTTTCTGTGCCTGTAGTTTCAGATCTGATTGTTATATCAGACAAAGCATACACAAGGAAAGAAGTTCTGGAAATGGAGAAGGTGATGGTCAACACATTGAAGTTTAACATATCTGTGCCGACAGCATATGTTTTCATGAAACGATTCCTGAAGGCTGCTCAAGCAGACAGAAAACTTGAGTTGCTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTAGAATATGCAATGTTGAAGTTCCCTCCTTCTCAACTTGCTGCAGCTGCTGTCTATACAGCTCAATGCACTATCTTTGGTGTCAAACTGTGGAATAAGACGTGTGAATGGCACACCAACTACTCAGAAGATCAACTATTAGAGTGTTCTAGTTTAATGGTTGATTTTCACAAGAAGGCTGGGATAGGGAAACTTACTGGTGCACATAGGAAGTATTGCACATCCAAATTTAGCTTTACGGCAAAATGTGAACCGGCAACTTTTCTTCTGGAGGACAACAACCTGTAG 1302 0.4017 MKVSEDKSYNNSNSINPTNFQGGLDSRKIGQNRRVLGVINQNLVMEGRPYPCVVNKRALSERNEVCEKKQADPGHRPITRRFAAKVVADTKKSNAEGTTKRSNLGNSNGFADSIFVDDEHKPAEDQPVPMALEQIEEPTLVGSDQMEEVEMEDIMEEPVLDIDTCDADNPLAVTEYIEDLYSFYRKVESTGCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLVHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIVISDKAYTRKEVLEMEKVMVNTLKFNISVPTAYVFMKRFLKAAQADRKLELLAFFLVELSLVEYAMLKFPPSQLAAAAVYTAQCTIFGVKLWNKTCEWHTNYSEDQLLECSSLMVDFHKKAGIGKLTGAHRKYCTSKFSFTAKCEPATFLLEDNNL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1188 433 Gene3D - 179 418 - -
Tpr2g1188 433 Pfam Cyclin, C-terminal domain 307 422 IPR004367 -
Tpr2g1188 433 PANTHER CYCLIN-B2-1 22 427 - -
Tpr2g1188 433 CDD CYCLIN 305 392 IPR013763 -
Tpr2g1188 433 SMART cyclin_7 311 393 IPR013763 -
Tpr2g1188 433 SMART cyclin_7 214 298 IPR013763 -
Tpr2g1188 433 CDD CYCLIN 208 297 IPR013763 -
Tpr2g1188 433 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Tpr2g1188 433 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Tpr2g1188 433 PANTHER CYCLINS 22 427 IPR039361 -
Tpr2g1188 433 PIRSF Cyclin_A_B_D_E 6 432 IPR039361 -
Tpr2g1188 433 Gene3D - 193 305 - -
Tpr2g1188 433 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
Tpr2g1188 433 MobiDBLite consensus disorder prediction 1 26 - -
Tpr2g1188 433 SMART Cyclin_C_2 307 424 IPR004367 -
Tpr2g1188 433 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1188 Tpr-Chr2 13872522 13875769 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1188 10 428 Core Cell Cycle Gene Families AT1G20610 56.075 9.34e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1188 K21777 - gmx:100798068 686.026