Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1187 ATGCTCTATTTATTTGTTTTTTTTTTCGTTGCTTTTTTTTTTGTTGTTGGTGAGGATGTGGTGGTTATAGTGGATGGTGTTCTCTTCCATCGATCCTCTGTGGTGAAACTAAGTGGAATGTCTGAAAGAGCTTATATTAAATCTATAATGTTGAAGCTAGATGTGAGAGAATTGGCGATTCAATTCGGTTGTGTTCGGATTATACCTTATGTTCGTTACGGTCTTAAGCTGATTATAATGCAAAGCTTTCTGATTTTGGCCTGGCAAGGGATCGCTAAAATCGTTGTTATTGTAGGCCATCTTACTACTAATAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTAGAAATATTAACTGAATCCAAGTTCAGGCCTAACATGAATGAAGTTGTTAGAACTTTGGAGAAGCTGCAAGTTCCTAATTTGAATGTAGGCAATCTAAAGCATGCTGATGGACAATCTCCAAACTTGCTTTCATGTATACATGATTCTTTCTGGCTATTGATGAAAAACATTGGCCAAGATTTTTTTTCTGTCATCATTATGCGAAACAAACAACATTTAAAATTGATTTGGAATATGATACAAAGTCCGGTGTTTATGGCTGTTGCTTTTTATTTATGTGCAAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAAGCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGGGTAGCTAAAGAAAAGAAAGATCCTAAAGAAGTTAAGACCAATAGAGATTTGCTTGATGTCTTACCAAGCAAAAGAAAAGCTGAGGACGGTAGCTATTTGTCTGATGATGGAGCAGAGACATCCTATTCTTGGTAG 879 0.3584 MLYLFVFFFVAFFFVVGEDVVVIVDGVLFHRSSVVKLSGMSERAYIKSIMLKLDVRELAIQFGCVRIIPYVRYGLKLIIMQSFLILAWQGIAKIVVIVGHLTTNSDVYSFGVVLLEILTESKFRPNMNEVVRTLEKLQVPNLNVGNLKHADGQSPNLLSCIHDSFWLLMKNIGQDFFSVIIMRNKQHLKLIWNMIQSPVFMAVAFYLCAKKHKLKVDKIKLIELCGTSEAEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRDLLDVLPSKRKAEDGSYLSDDGAETSYSW* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1187 292 MobiDBLite consensus disorder prediction 273 292 - -
Tpr2g1187 292 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 196 286 IPR020529 GO:0005664|GO:0006260
Tpr2g1187 292 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 26 77 IPR020529 GO:0005664|GO:0006260
Tpr2g1187 292 Gene3D Transferase(Phosphotransferase) domain 1 27 172 - -
Tpr2g1187 292 PANTHER BNAC05G50940D PROTEIN 26 77 - -
Tpr2g1187 292 PANTHER BNAC05G50940D PROTEIN 196 286 - -
Tpr2g1187 292 SUPERFAMILY Protein kinase-like (PK-like) 99 139 IPR011009 -
Tpr2g1187 292 Gene3D - 177 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1187 Tpr-Chr2 13867139 13870871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1187 27 72 Core DNA Replication Machinery Family AT1G26840 52.727 1.09e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr2g1187 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1187 K02608 - gmx:100777539 162.925