Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1186 ATGAAGGTTTCTGAGGAGAACAGTTCTATCCCAAATTTTCAAGGAGGGTTAGATGCTAAAAAGGTTGGGCAAAACAGAAGGGTGTTGGGAGTGATTAATCAGAATCTGGTTGTGGAAGGGAGACCGTATCCATGTGTTGTTAACAAAAGGGCATTATCAGAAAGAAATGAGGTTTGTGAGAAGAAGCAAGCGGATCCAGGGCATCGACCCATTACTAGGAGGTTTGCTGCAAAAAATGCTGGCACACAGAAATCTAAAGCTGAGGGAACTACCAAAAGGTCAAATTTGGGAAATTCAAATGGATTTGCAGATAGTATATTTGTTGATGATGAACACAAGCTGGCGGAAGATCAGCCAGTGCCAATGGCTTTAGAGCAAATAGAACAGATGCTTAGTGAATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATGGAAGAGCCTGTTTTGGACATTGACATCTCTGATGCAGATAACCCTCTCGCGGTTACTGAATATATTGAAGATCTTTATTCTTTCTACAGGAAAGTTGAGAGTACTGGCTGTGTCTCACCAAATTATATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCCATACTCATTGACTGGCTTATTGAGGTGCATGACAAATTCGACCTCATGCATGAGACACTGTTTCTTACAGTTAATCTGATAGACAGATTTTTGGAAAAGCATACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTGGCAATGCTTTTGGCATGCAAGTATGAAGAAGTTTCTGTGCCTGTGGTCGGCGATCTAATTCTTATATCAGACAGAGCATACAACCGGAAAGAAGTTCTGGAAATGGAGAAGGTGATGGTCAACGCATTGAAGTTTAACATATCTGTGCCAACAGCATATGTTTTCATGAAAAGGTTTCTGAAGGCAGCTCAAGCAGACAGAAAACTTGAGCTGCTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTAGAATATGCGATGTTGAAGTTCCCTCCTTCTCAACTTGCTGCAGCTGCTGTCTATACAGCTCAATGCACTATCTTTGGTGTCAAACTGTGGAATAAGACGTGTGAATGGCACACCAACTACTCAGAAGATCAACTATTAGAGTGCTCTAGTTTAATGGTTGATTTTCACAAGAAGGCTGGGACAGGGAAACTTACAGGGGCACATAGGAAGTATTGCACATCCAAGTTTAGCTTTACTGCAAAATGTGAACCAGCAACTTTTCTTCTGCAAAATGATAATGAGAACAACCTGTAG 1284 0.412 MKVSEENSSIPNFQGGLDAKKVGQNRRVLGVINQNLVVEGRPYPCVVNKRALSERNEVCEKKQADPGHRPITRRFAAKNAGTQKSKAEGTTKRSNLGNSNGFADSIFVDDEHKLAEDQPVPMALEQIEQMLSESDQMEEVEMEDIMEEPVLDIDISDADNPLAVTEYIEDLYSFYRKVESTGCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKHTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYNRKEVLEMEKVMVNALKFNISVPTAYVFMKRFLKAAQADRKLELLAFFLVELSLVEYAMLKFPPSQLAAAAVYTAQCTIFGVKLWNKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYCTSKFSFTAKCEPATFLLQNDNENNL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1186 427 Gene3D - 170 409 - -
Tpr2g1186 427 CDD CYCLIN 199 288 IPR013763 -
Tpr2g1186 427 PANTHER CYCLINS 17 419 IPR039361 -
Tpr2g1186 427 ProSitePatterns Cyclins signature. 200 231 IPR006671 -
Tpr2g1186 427 CDD CYCLIN 296 383 IPR013763 -
Tpr2g1186 427 PIRSF Cyclin_A_B_D_E 4 427 IPR039361 -
Tpr2g1186 427 SMART Cyclin_C_2 298 415 IPR004367 -
Tpr2g1186 427 Gene3D - 184 296 - -
Tpr2g1186 427 SUPERFAMILY Cyclin-like 159 295 IPR036915 -
Tpr2g1186 427 Pfam Cyclin, N-terminal domain 170 296 IPR006671 -
Tpr2g1186 427 MobiDBLite consensus disorder prediction 61 96 - -
Tpr2g1186 427 Pfam Cyclin, C-terminal domain 298 413 IPR004367 -
Tpr2g1186 427 SMART cyclin_7 205 289 IPR013763 -
Tpr2g1186 427 SMART cyclin_7 302 384 IPR013763 -
Tpr2g1186 427 SUPERFAMILY Cyclin-like 297 415 IPR036915 -
Tpr2g1186 427 Coils Coil 424 427 - -
Tpr2g1186 427 PANTHER CYCLIN-B2-1 17 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1186 Tpr-Chr2 13859659 13863512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1186 12 419 Core Cell Cycle Gene Families AT1G20610 57.656 5.45e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1186 K21777 - gmx:100798068 682.945