Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1156 ATGGCTAGTAACAATAATGAGAAGGAGAGAGACATTGAGTTTATGTTTATCGATGATGATGTAGAGGAAGGTGAACAACATGAAAAGATGGAGAGTGAGAGTAACGGTGAAAGTGATGATGGCAGTGATGTTGATGAGGGAAATCATAGGGATCAACCTCAATCTTTCACTTCTCAGATATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCTACAGCTCCAACTTTTGGGTCAATCATAAGAGGACCAAGTTTTATTTATTCAAGTTTTACCAATCGTTCAAAGAGTAACTTAGAAATAGATGGAAAGACTCCTTTTCTATCATCAGGTCTTGATCAAGGTACTGTTCAAACAACAACATGGTGGGAGAAAGGTTCAATGCAAAATCTTGCTGGAGAAATGCCTATTGGTTATGGTTGCAGCCTTACTCAAACAGTTTTCAATGCGATTAATGTGATGGCTGGAGTTGGACTTTTGTCTACACCTTATACAGTGCAACAAGCCGGTTGGGCGGGATTGGTGGTGATGCTTATTTTTGCAGGTGTTTGTTGCTATACTGCTACCCTTATGAAACGCTGTTTCGAAAGCAGAGAAGGACTTACTAGCTATCCAGATATAGGCGAAGCTGCATTCGGTAGATATGGCCGTATTTTTGTATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCCGGAACATCCTTAGATTTAGGTGGTCTCCATTTAGATACCACACACTTGTTTGGAATTCTGACAGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTCCGAATAATCTCGTATCTATCAGTTGGAGGGATTGTAGCGACAATATTGATTATCATTTGTGTGTTCTCTGTCGGGACAACCGTTGGATTCCATCATACTGGCCAAGTGGTGAATTGGAGTGGCATTCCGTTTTCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTCTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAATATACAAAAGCATTGATAATATGTTTTGTTCTGTGTATTTTGATATACGGAAGCGTTGCAGTCATGGGATTTCTCATGTTTGGTGATGACACTTTGTCTCAGATAACATTGAATATGCCGACAGGTGCAATTGCTTCCAAAGTTGCGTTATGGACAACAGTAATTAACCCATTGACCAAATATGCTTTGTTGATGAATCCACTCGCAAGGAGTCTAGAGGAATTGCTTCCGAATAGAGTTTCAAGTACTTATTGGTGTTTTATTCTTCTTAGAACAGCACTTGTTGCATCTACAGTTTGTGCTGCTTTTCTGATTCCGTTTTTTGGACTTGTGATGGCTTTGATCGGTTCTCTCTTCAGTATGCTTGTGTCAGTGATAATGCCTAGTTTATGCTTTTTAAAAATTGTGGGGAAAAAGGCTACAAAGGCACAGGTTATCGCGAGCGTTATAATTGCTGCAGCTGGAATCATTTGTGGATTCATTGGATCATATTCCTCTTTGATGAATATTGCTGATAGTTACTAA 1593 0.3911 MASNNNEKERDIEFMFIDDDVEEGEQHEKMESESNGESDDGSDVDEGNHRDQPQSFTSQIWPQSYKETTDSYTIATAPTFGSIIRGPSFIYSSFTNRSKSNLEIDGKTPFLSSGLDQGTVQTTTWWEKGSMQNLAGEMPIGYGCSLTQTVFNAINVMAGVGLLSTPYTVQQAGWAGLVVMLIFAGVCCYTATLMKRCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGLHLDTTHLFGILTALIILPTVWLKDLRIISYLSVGGIVATILIIICVFSVGTTVGFHHTGQVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMADKKQYTKALIICFVLCILIYGSVAVMGFLMFGDDTLSQITLNMPTGAIASKVALWTTVINPLTKYALLMNPLARSLEELLPNRVSSTYWCFILLRTALVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGKKATKAQVIASVIIAAAGIICGFIGSYSSLMNIADSY* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1156 530 MobiDBLite consensus disorder prediction 27 50 - -
Tpr2g1156 530 MobiDBLite consensus disorder prediction 1 62 - -
Tpr2g1156 530 PANTHER OS05G0424000 PROTEIN-RELATED 32 528 - -
Tpr2g1156 530 Pfam Transmembrane amino acid transporter protein 145 521 IPR013057 -
Tpr2g1156 530 MobiDBLite consensus disorder prediction 1 15 - -
Tpr2g1156 530 PANTHER AMINO ACID TRANSPORTER AVT1A 32 528 - -
Tpr2g1156 530 Gene3D Amino acid/polyamine transporter I 143 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1156 Tpr-Chr2 13531765 13536463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1156 1 465 Amino Acid or Auxin Permease AAAP Family AT2G41190 61.845 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1156 K15015 - gmx:100790344 808.905