Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1146 ATGGAAGAAGTTTGGAAAGACATTAACTTATCTTCATTGAATGACCAAAACACAAGACCTATGTTGAATACTCGTTCTACTTTTGGTGGTGGTGTTATTCTTCAAGATTTTCTTACTAGACCCCTTAACATTGACCCACCAAAAAGCTTAGATTATTCTTCTAATAATTCATCTTCTTCTGTTGCTTCAGATCAAAATAATACTAATAATGGTTCTTTTTATTGTTCTGCCACACCACCACCACTTGTCACTGCTCTTAGTTTGAATTCTCATCCTGATTTTCACTTTGACCCTCTTATCAGACAAAACAAGAACAATAATTCTCAGTTACTACTTCAACAGCAACAGAATGTTGCTGCTTGTTTTGTGAATCCTTCATCTTATGAACAGAATGTGGGTGTTGGTTCTAATTCTTTCACTTGTTTTGGGAAGAGGTTTGGTGAACCTGAGATTAGTCCTGGTGAAAGAAGAAATAACAGGATGATCAAGAATAGGGAATCTGCTGCACGTTCACGAGCTAGAAAACAGGCTTACACAACTGAACTAGAACAGAAAGTTCAACTATTACAGGAAGAAAATGCAAGACTTAAAAGACAGCAAAAAGAGTTATTTGAAGCAGAAATTGGTGTTCAACAAAAGAAGAATAGCATATCTCGAACATCATCATTTTAA 672 0.3542 MEEVWKDINLSSLNDQNTRPMLNTRSTFGGGVILQDFLTRPLNIDPPKSLDYSSNNSSSSVASDQNNTNNGSFYCSATPPPLVTALSLNSHPDFHFDPLIRQNKNNNSQLLLQQQQNVAACFVNPSSYEQNVGVGSNSFTCFGKRFGEPEISPGERRNNRMIKNRESAARSRARKQAYTTELEQKVQLLQEENARLKRQQKELFEAEIGVQQKKNSISRTSSF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1146 223 SMART brlzneu 152 217 IPR004827 GO:0003700|GO:0006355
Tpr2g1146 223 CDD bZIP_plant_BZIP46 156 203 - -
Tpr2g1146 223 PANTHER PROTEIN FD-LIKE 1 220 - -
Tpr2g1146 223 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 220 IPR043452 GO:0003700|GO:0045893
Tpr2g1146 223 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 154 203 IPR004827 GO:0003700|GO:0006355
Tpr2g1146 223 Pfam bZIP transcription factor 156 204 IPR004827 GO:0003700|GO:0006355
Tpr2g1146 223 SUPERFAMILY Leucine zipper domain 156 204 IPR046347 GO:0003700|GO:0006355
Tpr2g1146 223 Coils Coil 175 209 - -
Tpr2g1146 223 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 160 174 IPR004827 GO:0003700|GO:0006355
Tpr2g1146 223 Gene3D - 154 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1146 Tpr-Chr2 13422195 13423719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1146 1 182 bZIP Transcription Factor Family AT4G35900 37.374 8.93e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr2g1146 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1146 K14432 - mtr:MTR_7g015990 169.859