Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1139 ATGGAGAAACATGAAACACAACATTGGTTTGTAAGAGCAAAACCATTCATAGCAGTTGTGTTTTTGCAATTTGGATATGCAATTATGGATGTTTTATCAAAGGCTGCAATGAATAAGGGAATGAGCAATTATGTATTTATTGTGTATCGACATGTTGTAGCATTCATTTTCATAACCCCTTTTGCACTCTATTTTGACATCTATAAATATAAGAAAGTAAGGACTAAAATGACATTTTCAATCTTCATGAAGATAGTGTTGCTCAGCTTTCTAGAACCTGTTATTGGTCAAAATTTGTATTTTTTAGGGATGAAGTACACAACAGCAACCTTTGCAGCTGCCATGACCAATATCCTTCCTGCCAGTGCCTTTATCTTGGCCTGCATTTTTAGGCTTGAGAAGATAAAGGTAAAATGTATAAGGAGCCAAGCAAAAGTGGTGGGAACCATAGCATCTGTTTCAGGTGCAATGGTGATGACTCTAATTAAAGGCCCTGTACTTTTAGGGACATTTGGAGGCAATAGTCATAACCAGCATACTGATGAGACCAATACTCAACCTGTAGTAGCTGGCTCTATAATGATTGCATTAGGATGCTTTAGTTGTGCTTGTTTTGTGATCGTTCAAGCTATTACCCTTAAAACCTATCCTGCACCACTCTCTCTTGCCTCATGGATATGTTTTTTGGGCACACTTGAAACTGCAGTAGTGGCTATGATTATGGAATGGTGTAATCCTTCAGTTTGGTATATAAAATGGGATATGAGATTGTTGTCTATTGTTTACACTGGTATAGTCTGCTCAGGGGTGTTATATTTTGTGCAAGGAGTAGTGGTGAAATCTAGAGGCCCAGTATTTGTAACAGCGGTTAGTCCTTTATGCACAGTAATTGTTGCTATCTTGGGATACTTCATTTTGGCGGAAGAATTGTTCCTTGGAAGGGTTATAGGTGCTGTTATCACTTGTTTGGGCCTATACCTTGTTGCTTGGGGCAAAAGCAAAGACTACACTCCATCAGATCCAGTTATTCAAGAATTTGTATTTTCAGCTGATGAAGGCAATGTTAAGAATGAACATTTTGCTCAAGAGATCATCACTATTCAGTAA 1107 0.3794 MEKHETQHWFVRAKPFIAVVFLQFGYAIMDVLSKAAMNKGMSNYVFIVYRHVVAFIFITPFALYFDIYKYKKVRTKMTFSIFMKIVLLSFLEPVIGQNLYFLGMKYTTATFAAAMTNILPASAFILACIFRLEKIKVKCIRSQAKVVGTIASVSGAMVMTLIKGPVLLGTFGGNSHNQHTDETNTQPVVAGSIMIALGCFSCACFVIVQAITLKTYPAPLSLASWICFLGTLETAVVAMIMEWCNPSVWYIKWDMRLLSIVYTGIVCSGVLYFVQGVVVKSRGPVFVTAVSPLCTVIVAILGYFILAEELFLGRVIGAVITCLGLYLVAWGKSKDYTPSDPVIQEFVFSADEGNVKNEHFAQEIITIQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1139 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 333 - -
Tpr2g1139 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 139 - -
Tpr2g1139 368 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
Tpr2g1139 368 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Tpr2g1139 368 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
Tpr2g1139 368 PANTHER WAT1-RELATED PROTEIN 10 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1139 Tpr-Chr2 13312739 13316427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1139 1 368 Nodulin-like Gene Family AT2G37460 56.800 5.26e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1139 - - gmx:100811147 487.263