Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g1133 | ATGAATATTTGCCGCGGTCTCAAAAACTCTTGCGATCACAAACCACCTAAGGAAAAACATCGATGGAGTTTCGTCAAATCATACAGAGAAGAAGAACAACAACACAGCAGCCAGGTACACGTCCTGGACGACAAACAAGCCATCGCTGTCGCTGCTGCTGCCGTTGTTAGCAGTAACGGAATCGTCAGGATACGCGAACAATGGGCGGCCGTTAAGATCCAATCCATTTTTCGAGGAAGCAAGAAAGGCGCTCTGAGCATTAAAAGGGCTGGTGAAGTTTCAGGCATTGGTGAGAGAGGTCACATTCAGCGGAAACGAATGGCAGAGTGCCTCGAAAAAATGCATTCACTTTTACGGGCACAGGCACGATATAATGCAGCGCGGACTCACCAAACCTCACACTCTAATGTAAAATCTGAAGAAAGTCCTGTTAGATCTAGAAGCCCTTTTACTCCTAGAAGTGATGGTTCAAGAAACTACCTTAGAGACTATTCTCATTCCCCAAGTTACATGGCTCATACAGAATCATCAAAGGCAAAACATAGATCTTTGAGTACACCAAAGCAAAGGCCTCAAACGAAGATGATGTTCTGCCATAATTTGTTCCACCATAATACTTCAAAACAGATAGCATGTTATTAG | 642 | 0.4408 | MNICRGLKNSCDHKPPKEKHRWSFVKSYREEEQQHSSQVHVLDDKQAIAVAAAAVVSSNGIVRIREQWAAVKIQSIFRGSKKGALSIKRAGEVSGIGERGHIQRKRMAECLEKMHSLLRAQARYNAARTHQTSHSNVKSEESPVRSRSPFTPRSDGSRNYLRDYSHSPSYMAHTESSKAKHRSLSTPKQRPQTKMMFCHNLFHHNTSKQIACY* | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g1133 | 213 | MobiDBLite | consensus disorder prediction | 125 | 155 | - | - | |
| Tpr2g1133 | 213 | PANTHER | CALMODULIN BINDING PROTEIN IQD22 | 99 | 137 | - | - | |
| Tpr2g1133 | 213 | PANTHER | CALMODULIN BINDING PROTEIN IQD22 | 6 | 79 | - | - | |
| Tpr2g1133 | 213 | PANTHER | CALMODULIN BINDING PROTEIN IQD22 | 134 | 200 | - | - | |
| Tpr2g1133 | 213 | PANTHER | IQ-DOMAIN 5-RELATED | 134 | 200 | - | - | |
| Tpr2g1133 | 213 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 79 | - | - | |
| Tpr2g1133 | 213 | PANTHER | IQ-DOMAIN 5-RELATED | 99 | 137 | - | - | |
| Tpr2g1133 | 213 | MobiDBLite | consensus disorder prediction | 125 | 191 | - | - | |
| Tpr2g1133 | 213 | Pfam | Protein of unknown function (DUF4005) | 136 | 193 | IPR025064 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr2g1133 | Tpr-Chr2 | 13245584 | 13246351 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr2g1133 | 67 | 136 | IQD Protein Family | AT4G23060 | 45.833 | 8.59e-10 | 55.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g1133 | - | - | ahf:112800814 | 92.4337 |