Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1121 ATGCGTCCACCAATGAAGAAAATTGATTACAAAGTTGGAGACAAAGTTGAAGTATGTAGCAAAGAAGAAGGGTTTATGGGTTCATACTATGAAGCCACAATTGTTTCTTGTCTTGATAATGGAAGATATGTTATTTGTTACAAGAATCTTCTTAAAGATGACGAGTCCGGACTTCTCATTGAAACACTTCTTCCAAAGGATCTTCGTCCATCACCGCCACGTGTTCGTAACCCTTCAAAGTTCCAACTCAATCAAAAAGTTGATGTTTTTGATAATGATGGTTGGTGGGTAGGGAACATCGTCAGCGAGAAAATCCTCATGGAAAAGAATTATTACTATAATGTGTATTTTTATTCTACTAATCAAACTATTTACTACCCTTGTGGTAAAATTAGGGTTCACCATGATATGATGTTTAGTGGAGAGTGGTTTATGGAAGCTTAA 444 0.3604 MRPPMKKIDYKVGDKVEVCSKEEGFMGSYYEATIVSCLDNGRYVICYKNLLKDDESGLLIETLLPKDLRPSPPRVRNPSKFQLNQKVDVFDNDGWWVGNIVSEKILMEKNYYYNVYFYSTNQTIYYPCGKIRVHHDMMFSGEWFMEA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1121 147 Pfam Agenet domain 13 73 IPR008395 -
Tpr2g1121 147 PANTHER - 8 144 - -
Tpr2g1121 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 144 - -
Tpr2g1121 147 Gene3D - 4 57 - -
Tpr2g1121 147 SMART agenet_At_2 8 76 IPR014002 -
Tpr2g1121 147 SMART agenet_At_2 79 139 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1121 Tpr-Chr2 13164392 13165025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1121 20 98 PHD Transcription Factor Family AT5G58610 37.374 3.44e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1121 - - mtr:MTR_4g079980 225.713