Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1117 ATGGCTGTTTGGGCGAACATGTTACCTCATTGTATGGCATTTTTTCTTCTTTTACTTTTCTTCTTCATGTGTAGATCAGGAGCAAAGGTTGTCACAATTGATGTGCGAGCAGCCAAGAATCTCATCCAAACCAATCACATTTATCTTGATGTTAGGACGGTGGAAGAATTTGCGAAAGGGCATGTAGATGCAGCTAAGATCATTAATATTCCATACATGATGGATACACCCAAGGGCAGGGTGAAGAATCCAGATTTTCTAAAGGAGGTTTCATCTATTTGCAATAAAGAAGATCAGCTTGTTGTGGGTTGCCAAAGTGGGGTTAGATCTTTGTATGCAACTTCTGATCTTCTATCTGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGTTATGTGGACTGGGTTAGAAACAAGTTTCCAATTAATACTTCAGTGGCCAAAGAAGAACTATAA 456 0.3947 MAVWANMLPHCMAFFLLLLFFFMCRSGAKVVTIDVRAAKNLIQTNHIYLDVRTVEEFAKGHVDAAKIINIPYMMDTPKGRVKNPDFLKEVSSICNKEDQLVVGCQSGVRSLYATSDLLSDGFKNVKDMGGGYVDWVRNKFPINTSVAKEEL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1117 151 Gene3D - 21 143 IPR036873 -
Tpr2g1117 151 Pfam Rhodanese-like domain 39 137 IPR001763 -
Tpr2g1117 151 ProSiteProfiles Rhodanese domain profile. 42 144 IPR001763 -
Tpr2g1117 151 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 29 142 IPR036873 -
Tpr2g1117 151 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 150 - -
Tpr2g1117 151 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 150 IPR044684 GO:0003824
Tpr2g1117 151 CDD RHOD 37 136 - -
Tpr2g1117 151 SMART rhod_4 33 141 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1117 Tpr-Chr2 13121146 13123717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1117 29 144 Sulfurtransferasese or Rhodanese AT5G66170 58.621 1.21e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1117 - K15692 gmx:100815122 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1117 2 13121146 13123717 Tpr4g4292 4 50083387 50085885 PCT