Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1114 ATGTTATTATTCCCTAATAACATTGTTGGTGAAAAATGGCTAGGATTTGTGACAGCCATATGGGTTCAAGCAATATGTGGAAACAATTATACATTTGCAAATTATTCTGATGTGTTAAAGTCTCTAATGGCTTTGACTCAAATGCAGCTTAATAATCTCTCTGTTGCTAAAGATGTTGGTAAAGCTTTTGGTATTTTATCAGGTCTTGTTTCTGATCGTTGGCCAACTTCAATTATTCTTATGATTGGTGCTGTTTTGGGATTCATTGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATAGCTCCACTTCCTTATTGGATGATGTGTATATTCTTATGTATGGGAGGAAACAGCTCAACATGGATGAACACAGCAGTACTTGTAACTTGCATGAGAAACTTCTCAAAAAACCGCGGTCCAATTTCCGGCATTCTAAAGGGTTATGTAGGACTCAGCACAGCAATCTTCACTGATATATGCACAGCTTTGTTTTCTTCAGACCCATCAAAATTCCTCTTAATGCTCACAATTGTTCCTGCTGTCATTTGTTTCATTGCTGCTATTTTCCTTCATGAAACTCCACCAGCTTCAACTTCAACAGAAGAAAACCAAGAGACAAAGTTCTTCAATGTGTTTAACTTGATTGCAGTTACGGTCGCAGTTTATCTCTTGACATTTGATATAACTGGACCTCATAAACATGTTATTTCAATGATTTTCACATTAGGACTTTTGATCCTATTAGCTATGCCACTTCTTGTTCCTTTATATTTAGCTATCTTCAAAACTAGTCCTAGTATTGACAAAGAAAAACAGATTCATGAACCATTGCTAGCCGAAAAGATTGAAAAGGAAAATGAAAAGGAAAAGGAAAAGGAAGAGACATGTAACAAGGTAGAGGAAGATGAGATTAAGCGAAAACCAGTGTTAGGAGAAGAGCATACTATCATTGAAATGGCGAAAACGGTTGATTTTTGGGTTTTGTTTGTGTCATTTCTTTGTGGTGTGGGAACAGGACTATGTGTTATGAATAACATGGGACAAATGGGATTAGCACTTGGTTACCGCGATGTTTCGTTGTTCATTTCATTCATTAGCATTTGGGGTTTCTTTGGACGGATTCTTTCCGGTTCGCTCTCTGAATACTACATCAGGAAATCGGGCATGCCAAGGCTAGTATGGAATGCAGCTTCTCAAATTCTGATGTTTTTCGGTTACATTGCATTAGCTATGGCCTTACCAGGATCACTCTACATTGGATCAATGTTAGTAGGAATATGCTACGGAGTTCGTCTTACGATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTATACAACATTCTCATTCTCAATCTTCCTATTGGTTCATTCTTATTTTCTGGTCTCATTGCTGGTTATCTTTATGATATTGAAGCCACTAGTGTTCCGGGAGGCGGAAACACTTGTATTGGAGCACATTGTTTCATGCTTGTTTATTTGATTATGGCTTTTGCTTGTGTCATGGGGTGTGGATTGGATTTGTTACTTGCAGTTAGAACAAAAGAGTTATATTCCAAGATACATATAGAGAGAAATCTTGTGAATTCTCAAGTTCAACATTGA 1629 0.3732 MLLFPNNIVGEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNNLSVAKDVGKAFGILSGLVSDRWPTSIILMIGAVLGFIGYGVQWLVVSQRIAPLPYWMMCIFLCMGGNSSTWMNTAVLVTCMRNFSKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICFIAAIFLHETPPASTSTEENQETKFFNVFNLIAVTVAVYLLTFDITGPHKHVISMIFTLGLLILLAMPLLVPLYLAIFKTSPSIDKEKQIHEPLLAEKIEKENEKEKEKEETCNKVEEDEIKRKPVLGEEHTIIEMAKTVDFWVLFVSFLCGVGTGLCVMNNMGQMGLALGYRDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAASQILMFFGYIALAMALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFLFSGLIAGYLYDIEATSVPGGGNTCIGAHCFMLVYLIMAFACVMGCGLDLLLAVRTKELYSKIHIERNLVNSQVQH* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1114 542 Pfam Nodulin-like 12 258 IPR010658 -
Tpr2g1114 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 537 - -
Tpr2g1114 542 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 537 - -
Tpr2g1114 542 Gene3D MFS general substrate transporter like domains 12 207 IPR036259 -
Tpr2g1114 542 SUPERFAMILY MFS general substrate transporter 29 523 IPR036259 -
Tpr2g1114 542 CDD MFS_Mch1p_like 12 512 - -
Tpr2g1114 542 Gene3D MFS general substrate transporter like domains 240 512 IPR036259 -
Tpr2g1114 542 Coils Coil 281 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1114 Tpr-Chr2 13102878 13105987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1114 12 538 Nodulin-like Gene Family AT4G34950 63.686 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1114 - - cit:102624072 736.873