LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1114	ATGTTATTATTCCCTAATAACATTGTTGGTGAAAAATGGCTAGGATTTGTGACAGCCATATGGGTTCAAGCAATATGTGGAAACAATTATACATTTGCAAATTATTCTGATGTGTTAAAGTCTCTAATGGCTTTGACTCAAATGCAGCTTAATAATCTCTCTGTTGCTAAAGATGTTGGTAAAGCTTTTGGTATTTTATCAGGTCTTGTTTCTGATCGTTGGCCAACTTCAATTATTCTTATGATTGGTGCTGTTTTGGGATTCATTGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATAGCTCCACTTCCTTATTGGATGATGTGTATATTCTTATGTATGGGAGGAAACAGCTCAACATGGATGAACACAGCAGTACTTGTAACTTGCATGAGAAACTTCTCAAAAAACCGCGGTCCAATTTCCGGCATTCTAAAGGGTTATGTAGGACTCAGCACAGCAATCTTCACTGATATATGCACAGCTTTGTTTTCTTCAGACCCATCAAAATTCCTCTTAATGCTCACAATTGTTCCTGCTGTCATTTGTTTCATTGCTGCTATTTTCCTTCATGAAACTCCACCAGCTTCAACTTCAACAGAAGAAAACCAAGAGACAAAGTTCTTCAATGTGTTTAACTTGATTGCAGTTACGGTCGCAGTTTATCTCTTGACATTTGATATAACTGGACCTCATAAACATGTTATTTCAATGATTTTCACATTAGGACTTTTGATCCTATTAGCTATGCCACTTCTTGTTCCTTTATATTTAGCTATCTTCAAAACTAGTCCTAGTATTGACAAAGAAAAACAGATTCATGAACCATTGCTAGCCGAAAAGATTGAAAAGGAAAATGAAAAGGAAAAGGAAAAGGAAGAGACATGTAACAAGGTAGAGGAAGATGAGATTAAGCGAAAACCAGTGTTAGGAGAAGAGCATACTATCATTGAAATGGCGAAAACGGTTGATTTTTGGGTTTTGTTTGTGTCATTTCTTTGTGGTGTGGGAACAGGACTATGTGTTATGAATAACATGGGACAAATGGGATTAGCACTTGGTTACCGCGATGTTTCGTTGTTCATTTCATTCATTAGCATTTGGGGTTTCTTTGGACGGATTCTTTCCGGTTCGCTCTCTGAATACTACATCAGGAAATCGGGCATGCCAAGGCTAGTATGGAATGCAGCTTCTCAAATTCTGATGTTTTTCGGTTACATTGCATTAGCTATGGCCTTACCAGGATCACTCTACATTGGATCAATGTTAGTAGGAATATGCTACGGAGTTCGTCTTACGATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTATACAACATTCTCATTCTCAATCTTCCTATTGGTTCATTCTTATTTTCTGGTCTCATTGCTGGTTATCTTTATGATATTGAAGCCACTAGTGTTCCGGGAGGCGGAAACACTTGTATTGGAGCACATTGTTTCATGCTTGTTTATTTGATTATGGCTTTTGCTTGTGTCATGGGGTGTGGATTGGATTTGTTACTTGCAGTTAGAACAAAAGAGTTATATTCCAAGATACATATAGAGAGAAATCTTGTGAATTCTCAAGTTCAACATTGA	1629	0.3732	MLLFPNNIVGEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNNLSVAKDVGKAFGILSGLVSDRWPTSIILMIGAVLGFIGYGVQWLVVSQRIAPLPYWMMCIFLCMGGNSSTWMNTAVLVTCMRNFSKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICFIAAIFLHETPPASTSTEENQETKFFNVFNLIAVTVAVYLLTFDITGPHKHVISMIFTLGLLILLAMPLLVPLYLAIFKTSPSIDKEKQIHEPLLAEKIEKENEKEKEKEETCNKVEEDEIKRKPVLGEEHTIIEMAKTVDFWVLFVSFLCGVGTGLCVMNNMGQMGLALGYRDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAASQILMFFGYIALAMALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFLFSGLIAGYLYDIEATSVPGGGNTCIGAHCFMLVYLIMAFACVMGCGLDLLLAVRTKELYSKIHIERNLVNSQVQH*	543

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1114	542	Pfam	Nodulin-like	12	258	IPR010658	-
	Tpr2g1114	542	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	4	537	-	-
	Tpr2g1114	542	PANTHER	PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE	4	537	-	-
	Tpr2g1114	542	Gene3D	MFS general substrate transporter like domains	12	207	IPR036259	-
	Tpr2g1114	542	SUPERFAMILY	MFS general substrate transporter	29	523	IPR036259	-
	Tpr2g1114	542	CDD	MFS_Mch1p_like	12	512	-	-
	Tpr2g1114	542	Gene3D	MFS general substrate transporter like domains	240	512	IPR036259	-
	Tpr2g1114	542	Coils	Coil	281	304	-	-

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g1114	Tpr-Chr2	13102878	13105987	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g1114	12	538	Nodulin-like Gene Family	AT4G34950	63.686	0.0	720

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1114	-		-	cit:102624072	736.873

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