Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1104 ATGGGTGACATAGTGAAACAAATATTAACAAAACCAATCCAATTAGCAGACCAAGTAACAAAAGCAGCAGATGAAGCAAGTTCATTCAAACAAGAATGTAACGAACTCAAATCCAAAACTGAAAAACTCGCCGGACTTCTCCGACAAGCAGCAAGAGCAAGTTCCGATCTATACGAACGTCCAACAAAACGAATCATCGAAGAAACCGAACAAGTTCTCGATAAATCACTTTCCTTAGTCCTAAAATGTCGCGCAAATGGTATCATGAAACGTGTCTTCACCATAATCCCCGCCGCCGCTTTCCGTAAAACATCTTCTCATTTAGAAAACTCAATCGGAGATGTTTCTTGGCTCCTCCGTGTCTCTGCTCCGGCAGACGATCGCGGCGGTGAATATCTCGGACTTCCACCTATTGCTGCTAATGAACCTATTCTCTGTTTCATTTGGGAACAGATCGCTATACTATACACCGGTTCTATGGAAGATCGAAGCGACGCCGCAGCGTCGCTTGTTTCATTGGCACGTGGCAGTGACCGTTATGGGAAACTTATCATCGAAGAAGGTGGTGTTGGACCACTTCTGAAGCTGATTAAAGAAGGAAAAATTGATGGTCAAGAAAATGCTGCTAGAGCTATTGGTTTACTTGGTCGTGATGCTGAATGTGTTGAACATATGATTCATGTTGGTGTTTGTTCGGTTTTTGGAAAGATTCTTAAAGATGGTCCTATGAAAGTTCAAGGTGTTGTTGCTTGGGCTGTTTCTGAACTTGTTGCTAATTATCCTAAATGTCAAGATCTTTTTGCTCAGCATAATATTATTAGGTTACTTGTTGGTCATCTTGCTTTTGAAACTGTTGAAGAACATAGTAAATATGCTATTGTTAGTATGAAACCGACTTCGATTCACGCTGTTGTTATGGCGAGTAATAATAGTAATTCTAATTCTAATCTTAATCCTAAGAAAGGAAATGAAAATGAAGATGGTGGTGTCGGTGTTGGTGCTGGTGCTGGTGGTGGGAACAATAAGCATGGTCGCGTATCGCATCATCCATTGGGTGAACGACCGAGGAATTTGCATAGAGTGATTACAAGTACTATGGCAATTCATGCTGCTTCCAAGCAGAGTAGTGAAGGAAATGACTTGGCCGATTCCTATACGCCGCCTAATTCCAACGGATTTGGTAATGGTATTGGTAATGGTGGTGGTAAGCATGGAAATCATAGTAATCATCAGAGAAATTATTCGCATTCGGGAATTAATATGAAGGGAAGGGAAAGTGAAGACCCTGAGACTAAGGCAAGTATGAAGGAAATGGCAGCGAGAGCGCTATGGCATTTGGCTAAGGGTAATGTGCCGATTTGTCGCAGCATTACGGAATCAAGGGCTTTGCTGTGTTTTGCTGTTTTACTTGAGAAAGGACCGGAGGCTGTGCAGTATAATTCTGCTATGGCATTGATGGAGATTACTGCTGTGGCTGAGAAAGATGCTGAATTGAGAAAATCTGCATTTAAGCCTAATTCTCTTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATAATTGAGAAAGCGGATTCGGATCTCCTCATTCCTTGTGTCAGGGTGATTGGAAATTTGGCAAGGACATTCAAGGCTACCGAGACAAGGATGATTGGTCCGTTGGTGAAACTTCTTGACGAAAGAGAGGCAGAGGTTTCCAGGGAGGCGTCGATCGCACTCAAGAAATTTGCCGGCAGCGAAAACTACCTTCATGTTGATCACTCCAAAGCAATTATAAATGCAGGTGGGGCCAAACACTTGATTCAGCTTGTGTATTTCGGAGAACAAATGGTTCAGATTCCAGCATTGGTTCTGCTCTCTTACATCGCATTACATGTTCCGGATAGCGAAGAACTTGCTCTGGCTGAAGTGCTTGGAGTGCTTGAATGGGCATCCAAACAATCTTTCATGCAACATGATGAAACCCTCGAGACATTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCATCATAAATTGCATCAGTAG 2055 0.4268 MGDIVKQILTKPIQLADQVTKAADEASSFKQECNELKSKTEKLAGLLRQAARASSDLYERPTKRIIEETEQVLDKSLSLVLKCRANGIMKRVFTIIPAAAFRKTSSHLENSIGDVSWLLRVSAPADDRGGEYLGLPPIAANEPILCFIWEQIAILYTGSMEDRSDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKIDGQENAARAIGLLGRDAECVEHMIHVGVCSVFGKILKDGPMKVQGVVAWAVSELVANYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYAIVSMKPTSIHAVVMASNNSNSNSNLNPKKGNENEDGGVGVGAGAGGGNNKHGRVSHHPLGERPRNLHRVITSTMAIHAASKQSSEGNDLADSYTPPNSNGFGNGIGNGGGKHGNHSNHQRNYSHSGINMKGRESEDPETKASMKEMAARALWHLAKGNVPICRSITESRALLCFAVLLEKGPEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSLACKAVVDQVLKIIEKADSDLLIPCVRVIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALKKFAGSENYLHVDHSKAIINAGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHDETLETLLQEAKSRLELYQSRGSRGFHHKLHQ* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1104 684 Coils Coil 653 673 - -
Tpr2g1104 684 MobiDBLite consensus disorder prediction 387 428 - -
Tpr2g1104 684 Gene3D - 507 650 IPR011989 -
Tpr2g1104 684 SMART arm_5 218 258 IPR000225 GO:0005515
Tpr2g1104 684 SMART arm_5 584 624 IPR000225 GO:0005515
Tpr2g1104 684 SMART arm_5 177 217 IPR000225 GO:0005515
Tpr2g1104 684 SMART arm_5 450 490 IPR000225 GO:0005515
Tpr2g1104 684 SMART arm_5 506 541 IPR000225 GO:0005515
Tpr2g1104 684 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Tpr2g1104 684 Coils Coil 19 39 - -
Tpr2g1104 684 Gene3D - 3 121 IPR036537 GO:0007166
Tpr2g1104 684 PANTHER ARMADILLO REPEAT ONLY 2-RELATED 1 679 - -
Tpr2g1104 684 SUPERFAMILY ARM repeat 153 641 IPR016024 -
Tpr2g1104 684 Gene3D - 150 326 IPR011989 -
Tpr2g1104 684 Gene3D - 425 506 IPR011989 -
Tpr2g1104 684 PANTHER ARMADILLO REPEAT ONLY 4 1 679 - -
Tpr2g1104 684 MobiDBLite consensus disorder prediction 310 352 - -
Tpr2g1104 684 MobiDBLite consensus disorder prediction 387 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1104 Tpr-Chr2 12962884 12965560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1104 - - mtr:MTR_5g022240 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1104 2 12962884 12965560 Tpr2g1104 2 12962884 12965560 ECH
Tpr2g1104 2 12962884 12965560 Tpr4g4273 4 49905534 49908510 PCT