Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1101 ATGGGTATATGTTTTTCTTCTACAAAGGTTGTTAGCGGTTCTAATAGCAACACAACAAACAATGAAAACCGTAAACGTAATTCAACATCAACAACAAAGACAGAAAACGCTCCGGTGACAACAACATCGGCGACGGCGTCGACGACAAGGAAACGTCAAGTACCTAGCTCTAATCAACGACGTAAAGGCTCAGAAGAAGCACAAAAGAAAACCCATCAATCAAGACATAAAGATAAAGTTAGTTCGCGTGTTCCTTGTGGAAAAAGAACGGATTTTGGGTATGAGAAAGATTTTGATAAGAGATTTTCTCTTGGGAAATTGTTGGGGCATGGACAATTTGGTTATACTTATGTTGGTGTTGATAAATCTAATGGAGATCGTGTTGCTGTTAAGAGACTCGAGAAAGCTAAGATGGTTCTCCCTATAGCCGTTGAAGATGTAAAGAGAGAAGTCAAGATATTGAAAGAACTTACAGGCCATGAAAATGTCGTTCAGTTCTATAATGCTTTTGAGGATGACTCATATGTGTACATAGTTATGGAGTTATGCGAAGGTGGAGAACTACTAGACCGGATATTGGGAAAGAAGGACAGCCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCAGATGCTGAAGGTTGCAGCTCAGTGTCATTTACATGGCTTGGTGCATCGCGACATGAAGCCAGAGAATTTTCTATTCAAATCAAACAAAGACGATTCAGCTTTAAAGGCTACTGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAGATTTCAAGATATTGTTGGAAGTGCTTACTACGTTGCACCGGAAGTGTTGAAACGGAAGTCGGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTACTTTGTGGGAGACGACCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCCGATTTCCGACGGAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAGGAAATTGTTGGTAAAAGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATCCGAGATTCCGGTTGATATATCTGTCTTAAACAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAATTTGCATTAAGGGCATTGGCTAGCACACTTAACGAAGGCGAGTTTTCTGATCTAAAGGATCAATTTGATGCAATAGATGTGGACAAAAATGGCGCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCGTGGAAGTTGAAAGAATCTCGTGTATTAGAGATATTGCAAGCGATTGACAGCAACACAGATGGATTAGTAGATTTCACCGAGTTTGTAGCAGCTACATTACATGTACATCAATTGGAGGAACATGACTCTGAGAAGTGGCAACAACGGTCACAGGCTGCTTTTGATAAATTTGACTTAGATAAGGATGGCTTTATTACTCCGGAGGAACTGAGAATGCATACTGGTATGCGAGGCTCAATTGATCCTTTGCTCGAGGAAGCCGATATTGACAAAGATGGAAAGATCAGCTTACCAGAATTTCGGAGACTTTTAAGAACTGCAAGCATTGGTTCTCGAAATGTATCAAGCCCAACTCATCGTAATCGAAGGATGTAG 1692 0.4108 MGICFSSTKVVSGSNSNTTNNENRKRNSTSTTKTENAPVTTTSATASTTRKRQVPSSNQRRKGSEEAQKKTHQSRHKDKVSSRVPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGVDKSNGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILGKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSNKDDSALKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVRKLLVKDPRARLTAAQALSHPWVREGGEASEIPVDISVLNNMRQFVKYSRLKQFALRALASTLNEGEFSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSEKWQQRSQAAFDKFDLDKDGFITPEELRMHTGMRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNVSSPTHRNRRM* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1101 563 Pfam Protein kinase domain 104 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1101 563 SUPERFAMILY Protein kinase-like (PK-like) 99 373 IPR011009 -
Tpr2g1101 563 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Tpr2g1101 563 SMART serkin_6 102 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1101 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 553 - -
Tpr2g1101 563 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Tpr2g1101 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Tpr2g1101 563 ProSitePatterns EF-hand calcium-binding domain. 418 430 IPR018247 -
Tpr2g1101 563 Gene3D - 379 542 - -
Tpr2g1101 563 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Tpr2g1101 563 Gene3D Phosphorylase Kinase; domain 1 95 187 - -
Tpr2g1101 563 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Tpr2g1101 563 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Tpr2g1101 563 Pfam EF-hand domain pair 407 471 IPR002048 GO:0005509
Tpr2g1101 563 Pfam EF-hand domain pair 490 543 IPR002048 GO:0005509
Tpr2g1101 563 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 29 553 - -
Tpr2g1101 563 MobiDBLite consensus disorder prediction 58 86 - -
Tpr2g1101 563 SMART efh_1 488 516 IPR002048 GO:0005509
Tpr2g1101 563 SMART efh_1 446 474 IPR002048 GO:0005509
Tpr2g1101 563 SMART efh_1 518 546 IPR002048 GO:0005509
Tpr2g1101 563 SMART efh_1 409 437 IPR002048 GO:0005509
Tpr2g1101 563 MobiDBLite consensus disorder prediction 1 86 - -
Tpr2g1101 563 CDD STKc_CAMK 101 361 - -
Tpr2g1101 563 SUPERFAMILY EF-hand 394 545 IPR011992 -
Tpr2g1101 563 ProSiteProfiles Protein kinase domain profile. 102 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1101 563 ProSitePatterns EF-hand calcium-binding domain. 527 539 IPR018247 -
Tpr2g1101 563 ProSiteProfiles EF-hand calcium-binding domain profile. 522 549 IPR002048 GO:0005509
Tpr2g1101 563 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Tpr2g1101 563 Gene3D Transferase(Phosphotransferase) domain 1 188 369 - -
Tpr2g1101 563 MobiDBLite consensus disorder prediction 1 54 - -
Tpr2g1101 563 Gene3D - 403 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1101 Tpr-Chr2 12921781 12926712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1101 1 556 EF-hand Containing Proteins AT2G17890 74.778 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr2g1101 Pkinase 7.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1101 K13412 - gmx:100817249 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1101 2 12921781 12926712 Tpr2g1101 2 12921781 12926712 ECH