Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g1101 | ATGGGTATATGTTTTTCTTCTACAAAGGTTGTTAGCGGTTCTAATAGCAACACAACAAACAATGAAAACCGTAAACGTAATTCAACATCAACAACAAAGACAGAAAACGCTCCGGTGACAACAACATCGGCGACGGCGTCGACGACAAGGAAACGTCAAGTACCTAGCTCTAATCAACGACGTAAAGGCTCAGAAGAAGCACAAAAGAAAACCCATCAATCAAGACATAAAGATAAAGTTAGTTCGCGTGTTCCTTGTGGAAAAAGAACGGATTTTGGGTATGAGAAAGATTTTGATAAGAGATTTTCTCTTGGGAAATTGTTGGGGCATGGACAATTTGGTTATACTTATGTTGGTGTTGATAAATCTAATGGAGATCGTGTTGCTGTTAAGAGACTCGAGAAAGCTAAGATGGTTCTCCCTATAGCCGTTGAAGATGTAAAGAGAGAAGTCAAGATATTGAAAGAACTTACAGGCCATGAAAATGTCGTTCAGTTCTATAATGCTTTTGAGGATGACTCATATGTGTACATAGTTATGGAGTTATGCGAAGGTGGAGAACTACTAGACCGGATATTGGGAAAGAAGGACAGCCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCAGATGCTGAAGGTTGCAGCTCAGTGTCATTTACATGGCTTGGTGCATCGCGACATGAAGCCAGAGAATTTTCTATTCAAATCAAACAAAGACGATTCAGCTTTAAAGGCTACTGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAGATTTCAAGATATTGTTGGAAGTGCTTACTACGTTGCACCGGAAGTGTTGAAACGGAAGTCGGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTACTTTGTGGGAGACGACCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCCGATTTCCGACGGAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAGGAAATTGTTGGTAAAAGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATCCGAGATTCCGGTTGATATATCTGTCTTAAACAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAATTTGCATTAAGGGCATTGGCTAGCACACTTAACGAAGGCGAGTTTTCTGATCTAAAGGATCAATTTGATGCAATAGATGTGGACAAAAATGGCGCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCGTGGAAGTTGAAAGAATCTCGTGTATTAGAGATATTGCAAGCGATTGACAGCAACACAGATGGATTAGTAGATTTCACCGAGTTTGTAGCAGCTACATTACATGTACATCAATTGGAGGAACATGACTCTGAGAAGTGGCAACAACGGTCACAGGCTGCTTTTGATAAATTTGACTTAGATAAGGATGGCTTTATTACTCCGGAGGAACTGAGAATGCATACTGGTATGCGAGGCTCAATTGATCCTTTGCTCGAGGAAGCCGATATTGACAAAGATGGAAAGATCAGCTTACCAGAATTTCGGAGACTTTTAAGAACTGCAAGCATTGGTTCTCGAAATGTATCAAGCCCAACTCATCGTAATCGAAGGATGTAG | 1692 | 0.4108 | MGICFSSTKVVSGSNSNTTNNENRKRNSTSTTKTENAPVTTTSATASTTRKRQVPSSNQRRKGSEEAQKKTHQSRHKDKVSSRVPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGVDKSNGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILGKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSNKDDSALKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVRKLLVKDPRARLTAAQALSHPWVREGGEASEIPVDISVLNNMRQFVKYSRLKQFALRALASTLNEGEFSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSEKWQQRSQAAFDKFDLDKDGFITPEELRMHTGMRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNVSSPTHRNRRM* | 564 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g1101 | 563 | Pfam | Protein kinase domain | 104 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g1101 | 563 | SUPERFAMILY | Protein kinase-like (PK-like) | 99 | 373 | IPR011009 | - | |
Tpr2g1101 | 563 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 484 | 519 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | SMART | serkin_6 | 102 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g1101 | 563 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 29 | 553 | - | - | |
Tpr2g1101 | 563 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 405 | 440 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 224 | 236 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr2g1101 | 563 | ProSitePatterns | EF-hand calcium-binding domain. | 418 | 430 | IPR018247 | - | |
Tpr2g1101 | 563 | Gene3D | - | 379 | 542 | - | - | |
Tpr2g1101 | 563 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 442 | 477 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | Gene3D | Phosphorylase Kinase; domain 1 | 95 | 187 | - | - | |
Tpr2g1101 | 563 | ProSitePatterns | Protein kinases ATP-binding region signature. | 108 | 131 | IPR017441 | GO:0005524 | |
Tpr2g1101 | 563 | ProSitePatterns | EF-hand calcium-binding domain. | 455 | 467 | IPR018247 | - | |
Tpr2g1101 | 563 | Pfam | EF-hand domain pair | 407 | 471 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | Pfam | EF-hand domain pair | 490 | 543 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE | 29 | 553 | - | - | |
Tpr2g1101 | 563 | MobiDBLite | consensus disorder prediction | 58 | 86 | - | - | |
Tpr2g1101 | 563 | SMART | efh_1 | 488 | 516 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | SMART | efh_1 | 446 | 474 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | SMART | efh_1 | 518 | 546 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | SMART | efh_1 | 409 | 437 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Tpr2g1101 | 563 | CDD | STKc_CAMK | 101 | 361 | - | - | |
Tpr2g1101 | 563 | SUPERFAMILY | EF-hand | 394 | 545 | IPR011992 | - | |
Tpr2g1101 | 563 | ProSiteProfiles | Protein kinase domain profile. | 102 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g1101 | 563 | ProSitePatterns | EF-hand calcium-binding domain. | 527 | 539 | IPR018247 | - | |
Tpr2g1101 | 563 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 522 | 549 | IPR002048 | GO:0005509 | |
Tpr2g1101 | 563 | ProSitePatterns | EF-hand calcium-binding domain. | 497 | 509 | IPR018247 | - | |
Tpr2g1101 | 563 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 369 | - | - | |
Tpr2g1101 | 563 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Tpr2g1101 | 563 | Gene3D | - | 403 | 472 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g1101 | Tpr-Chr2 | 12921781 | 12926712 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g1101 | 1 | 556 | EF-hand Containing Proteins | AT2G17890 | 74.778 | 0.0 | 870 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Tpr2g1101 | Pkinase | 7.8e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g1101 | K13412 | - | gmx:100817249 | 937.176 |