Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1095 ATGGAACAACCTCAACAACAAAACCAAAATGAAGAAGCAGGTGGAGGTGGCAGTAGTGGAAAAGGGGGGTATATGAGCAGACAAAGTAGTACAAGATGGACACCAACAACAGATCAAATAAGAATATTGAAAGATCTTTACTACACCAATGGAATAAGATCACCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGATTAAGACAATATGGTAAGATTGAAGGAAAAAATGTCTTTTATTGGTTTCAAAATCATAAAGCTAGAGAAAGACAGAAGAAAAGATTCACTTCTGATGTTAACAATGTTGTTCTTCCTACTATTCAAAGATCAACACCAAATAACAATGTTATTTCTTCTGCTAATTGGAAAGTACCTGATCATGATCATCAACAACAGCATGTTAATGTTCTTACCAATCATTCTAATCACAACATTTCATCTTCTGGGCTTTCTACTGCTTCATGTTCTTCTGCTGAAATGGCTACTGTAGGCCAGATTGGAAATTATGGATATGGAACTGTGCCAATGGAGAAAAGTTTTAGGGAGTGCACAATATCAGCTGGATGTAGTAGTAGTAAAGTTGGAAGCACCATAAATAATCACTTAGGATGGATTGGTCATCATGTTGATCCATATTCTTCTTCAACAAATTATGCAAATTTATTTGGAAAATTAAAATCGAATGAAGAAATCATGGAAGAAGATGAAGAACAAGAACATGAAATTGAAACTCTTCCTTTATTTCCTATGCATGGTGAAGACATTAATCATGATGGCTATTGTAACCTCAAATCAAATTCATCTAACTATGGTGGTGCTGGCTATGGTTGGTATCAAGCTGAAAATCATGGTTTCATCAATGGTTCTTCCTTGGAACTTAGCCTCAACTCTTACACTCGTAGATCACCAGATTATGCTAATTGA 924 0.3561 MEQPQQQNQNEEAGGGGSSGKGGYMSRQSSTRWTPTTDQIRILKDLYYTNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVNNVVLPTIQRSTPNNNVISSANWKVPDHDHQQQHVNVLTNHSNHNISSSGLSTASCSSAEMATVGQIGNYGYGTVPMEKSFRECTISAGCSSSKVGSTINNHLGWIGHHVDPYSSSTNYANLFGKLKSNEEIMEEDEEQEHEIETLPLFPMHGEDINHDGYCNLKSNSSNYGGAGYGWYQAENHGFINGSSLELSLNSYTRRSPDYAN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1095 307 CDD homeodomain 31 93 IPR001356 GO:0003677
Tpr2g1095 307 ProSiteProfiles 'Homeobox' domain profile. 26 92 IPR001356 GO:0003677
Tpr2g1095 307 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 299 IPR044555 GO:0003700|GO:0099402
Tpr2g1095 307 MobiDBLite consensus disorder prediction 1 36 - -
Tpr2g1095 307 MobiDBLite consensus disorder prediction 1 15 - -
Tpr2g1095 307 PANTHER PROTEIN WUSCHEL 1 299 - -
Tpr2g1095 307 SMART HOX_1 28 96 IPR001356 GO:0003677
Tpr2g1095 307 MobiDBLite consensus disorder prediction 22 36 - -
Tpr2g1095 307 SUPERFAMILY Homeodomain-like 23 97 IPR009057 -
Tpr2g1095 307 Pfam Homeodomain 30 91 IPR001356 GO:0003677
Tpr2g1095 307 Gene3D - 24 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1095 Tpr-Chr2 12850828 12852529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1095 24 296 Wox Gene Family AT2G17950 41.196 9.90e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr2g1095 Homeodomain 3.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1095 - - vra:106776674 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1095 2 12850828 12852529 Tpr2g1095 2 12850828 12852529 ECH