Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1077 ATGGAGTCCATGGAGTCATGTGTCCCACCAGGCTTTCGCTTCCATCCAACTGATGAAGAACTAGTTGGTTATTATCTCAGAAAGAAAATCGCTTCTCAGAAAATCGATCTTGATGTTATCAGAGAGATCGATCTTTATCGTATCGAACCATGGGATCTTCAAGAGAGATGCAGGATTGGATATGAAGAACAAAATGAATGGTATTTTTTCAGTCACAAAGATAAAAAGTATCCAACTGGAACAAGAACTAATAGAGCTACCATGGCTGGGTTTTGGAAAGCTACAGGAAGAGATAAAGCAGTTTATGACAAAATGAAACTAATTGGGATGAGGAAGACTCTTGTTTTCTATAAAGGAAGAGCACCTAATGGACAAAAATCTGATTGGATCATGCATGAGTATAGACTTGAATCTGATGAAAATGGACCTCCACAGGAAGAAGGATGGGTTGTTTGTAGAGCATTTAAGAAAAGAACAACAAATAGCCAAAATACAAAAAGAACAATTGAAGGATGGGACACAACAAGCTACTTCTATGAAGAAGCTCCATGTGGTATCATCAACAATTCAATGGTGGATCCAATTGAGTTAATCTCAAGACAACCTCAAAGCTATTTATCTCAAACTTACAATATGTGTAAGCAAGAGATAGAAGCATGCATGCATGCAGAACAATTTGTACAGCTTCCTCAACTTGAAAGTCCTTCATTGCCATTATTAGTAAAGAGACCAAGCACGGTGTCTCTGGTATCATCCGAAATTAATAACGATGACACCGATGACCAAAACCGGTTATTATTATTATCCAACAATAATAATACAACAACTACGAATACGAATACGAATAATGTGACTGATTGGAGAGCTCTTGATAAATTTGTGGCTTCTCAACTAAGTCATGAAGTTGAAACTGATCAAGGAGTATTGTTGTCGAGTTTTGGTGCAACAAATAATAATCATAGCTCGGATATGGCATTGATGTTACTGCAACAAAGTAGTAGGGATGAAGGGAACAAGTTAAGTCCTTTTTTGAATGGAAGTTCAGATTGCAGTGATATTGGGATATGCATATTTGAAAAATGA 1083 0.3684 MESMESCVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNSQNTKRTIEGWDTTSYFYEEAPCGIINNSMVDPIELISRQPQSYLSQTYNMCKQEIEACMHAEQFVQLPQLESPSLPLLVKRPSTVSLVSSEINNDDTDDQNRLLLLSNNNNTTTTNTNTNNVTDWRALDKFVASQLSHEVETDQGVLLSSFGATNNNHSSDMALMLLQQSSRDEGNKLSPFLNGSSDCSDIGICIFEK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1077 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 338 - -
Tpr2g1077 360 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Tpr2g1077 360 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 338 - -
Tpr2g1077 360 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Tpr2g1077 360 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Tpr2g1077 360 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1077 Tpr-Chr2 12666376 12671613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1077 1 359 NAC Transcription Factor Family AT2G18060 61.316 4.79e-150 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g1077 NAM 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1077 - - aprc:113869508 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1077 2 12666376 12671613 Tpr2g1077 2 12666376 12671613 ECH
Tpr2g1077 2 12666376 12671613 Tpr4g4250 4 49651121 49657462 PCT