Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1053 ATGGAATGGTTTATAGGTGTATGTGTGAGCATAATTGTATTGTTAATAAGTTCTTGGTGGTTTGTGATGAAGAAGAAGAAGAAGAAGGAGAAAAATGGAAATAAAATACCAAAAGGAAATTCAGGTTGGCCTTTACTTGGAGAGACACTTGAGTTCATTGCTTCTGGCTATTCTTCTCGACCTGTCATCTTCATGGAAAATCGCAAGTCTATTTATGGGAATGTGTTTAAGACAAATATTTTGGGAAGCAATGTGATAATTTCAACAGATCCAGAAGTAAACAAGGTTATTCTGCAGAATCAAAGAAATATATTTGTCCCTGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCAATACTTCAATTGAATGGTAACATGCATAAGAAACTTCATTCACTCATTGCAGTGTTTCTTAAATCTCCACAATTTAAAGCTCAAATCACCAAAGATATTCAACATTCTGTCAAACAATGCTTAGCTTCTTGGACCAACAATACAATATACTTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTGATTAAAGTTTTGATGAGCATTGGTCCTGGTGAAGATTTGGATTTGTTGAAAAGAGAATTTGGAGAATACATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACATTATACAAATCCTTGAAGGCTAAGGAAAGGATGATGAAGATGGTGAGAAGGATAGTAGAGGACAGAATGAAGCTAATTATAGATAATAATGCAGACCGTTGTGCAGTGAATGATGTGGTGGATGCACTGTTAAGGGATAAGAGTGAGTTATACAACTCTAGCTCAAGTTCAAGCCTAATGGTGGAAATGATTAGCCAAAACATCATAGAGTTTATGATCCCAGGAGAAGAAACCCTTCCTACAGCCATGACATTAGCCCTCAAATTTCTCTCTGACTCTCCTCTCGCTCTATCGAAACTTATGGAGGAAAACATGGAATTGAAGAAGCAGAAGACTAATTGCTCAAATGAGTATACATGGACTGATTACATGTCACTGACATTTACTCAAAATGTCATCAGTGAAACTCTTAGAATGGCCAATATAGTCAATGGCATTTGGAGAAAAGCAGTCAAAGACGTCGAAATTAAAGGGTACCTAATTCCAAAAGACTGGTGTGTTATGGCATCTCTTACCTCAGTTCACATGGACGAAAAGAACTACGAAAATCCCTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGAGTGGTGGCTAGTAACAATTGTTTTACCCCATTTGGGAGTGGACATAGACTATGCCCTGGATTAGAACTTTCTAGGCTAGAACTTTCTATTTTCCTTCACCATCTTGTTACTACATACAGATGGATGGCTGAGAGGGATGAAATAATATACTTTCCAACTGTTAAGATGAAGAAAAAGCTCCCAATTAGAGTGCAACCCATTAACACCTCATTGGATTAG 1473 0.3659 MEWFIGVCVSIIVLLISSWWFVMKKKKKKEKNGNKIPKGNSGWPLLGETLEFIASGYSSRPVIFMENRKSIYGNVFKTNILGSNVIISTDPEVNKVILQNQRNIFVPAYPKSIRELMGEHSILQLNGNMHKKLHSLIAVFLKSPQFKAQITKDIQHSVKQCLASWTNNTIYFQDEVKKITFTILIKVLMSIGPGEDLDLLKREFGEYIKGLICLPIKFPGTTLYKSLKAKERMMKMVRRIVEDRMKLIIDNNADRCAVNDVVDALLRDKSELYNSSSSSSLMVEMISQNIIEFMIPGEETLPTAMTLALKFLSDSPLALSKLMEENMELKKQKTNCSNEYTWTDYMSLTFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPWRWEKIGVVASNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWMAERDEIIYFPTVKMKKKLPIRVQPINTSLD* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1053 490 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 9 483 - -
Tpr2g1053 490 Coils Coil 319 339 - -
Tpr2g1053 490 Pfam Cytochrome P450 37 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS E-class P450 group IV signature 348 364 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS E-class P450 group IV signature 397 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS E-class P450 group IV signature 420 436 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 SUPERFAMILY Cytochrome P450 35 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Tpr2g1053 490 Gene3D Cytochrome P450 24 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1053 490 PANTHER CYTOCHROME P450 26 9 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1053 Tpr-Chr2 12365049 12369515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1053 30 458 Cytochrome P450 AT3G13730 50.233 7.96e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1053 K12637 - gmx:100799030 774.237