Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1042 ATGGTGGGTGAACGAGCTAAGCTACACATAGCCTTAACTTTCTTACAATTTTGTCATGCAGGAAATCATATATTTCTCAGAATTGCACTTAATACAGGAGTTAGCAAGCTTGTTTTTCCTGTATATAGAAACATCACTGCTTTCATTCTTCTAGCTCCACTTGCATATTTCACAGAAAAGAAAGATAGGCCAAAAATAACCAGTTATTGTCTGCTACAATTTTTCCTTCTTGGACTTGTTGGAATAACAATGAAAGAAGGATTTTATCTCTTTGGTTTGGACAACACATCACCAACATTTGCTTCTGCTATGCAAAATTCTGTTCCAGCCCTTACATTTCTGATGGCTGTGTTACTAAGATATGAGAGCTTACACTTAAATAGGATAAATGGTATAGCTAAGGTTTTTGGAGTACTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAAGGACCTACCATTTATGCTCCAAATCTAGAACTTCACCAAAGACAATTTTTATTGTCGTTATTTGAGGATGCAAATGGGAAAAATTTGAACTTAGGTGGTATCCTTCTATTTGGTCATTGCTTGTGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAAGTACTCAGCGCAACTCACAGTTTCCGCTTTTACTTGCTTCTTTGGTGTTGTGCAGTTTGGGACAATTGCAGCCTTTCTTGAGAAAGATCCTAAATCTTGGAAGCTCAATTCCATTGAAGAGGCTTACAGTATTTTGTACTCGGGACTGGTGATTTCGGGGATGACAGCAGCAATACAAATATGGACTATTAACAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACAATACTCGTAGCTTTGATGGCGCCCATTGTTTTTGGTGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTCTTAATTATATCTGGGTTATACCTTGTTGTCTGGGGAAGAAGCCAAGAAACTAAGTTTGTTGAGGAGTTCATAATCTCCACTGAGCCTGAGAATCATTTGAAAGAAAAAAGTGACGGTTCTTCCCTCATAGAGCCATTGATTCCTGTGCACAATTCTTAG 1092 0.3846 MVGERAKLHIALTFLQFCHAGNHIFLRIALNTGVSKLVFPVYRNITAFILLAPLAYFTEKKDRPKITSYCLLQFFLLGLVGITMKEGFYLFGLDNTSPTFASAMQNSVPALTFLMAVLLRYESLHLNRINGIAKVFGVLASVGGASIITLYKGPTIYAPNLELHQRQFLLSLFEDANGKNLNLGGILLFGHCLCWSGWIVMQAFVLKKYSAQLTVSAFTCFFGVVQFGTIAAFLEKDPKSWKLNSIEEAYSILYSGLVISGMTAAIQIWTINKGGPVLASIYLPLQTILVALMAPIVFGEEFFLGGIIGAFLIISGLYLVVWGRSQETKFVEEFIISTEPENHLKEKSDGSSLIEPLIPVHNS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1042 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Tpr2g1042 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
Tpr2g1042 363 PANTHER WAT1-RELATED PROTEIN 5 333 IPR030184 GO:0016021|GO:0022857
Tpr2g1042 363 Pfam EamA-like transporter family 16 136 IPR000620 GO:0016020|GO:0016021
Tpr2g1042 363 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Tpr2g1042 363 PANTHER WAT1-RELATED PROTEIN 5 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1042 Tpr-Chr2 12286561 12289155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1042 2 358 Nodulin-like Gene Family AT1G75500 55.014 1.13e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1042 - - aprc:113869449 548.125