Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1033 ATGAGATCCTCAATGTTTGGTTCTTTTTCTTCCTCATTTACAAACATTGGTTCATCATCATCATCATGGTTTGAGCTATATGCTTCCTTCTCCACTTTCATGATGCTTTTAAGAACCGCAATCAATGATCTCATACCTTTAAGGCTTAGAACTTTCATCATCTCAAAGCTACAATCTTTCTTCACAAATTACCAACCCAACAATCAAGTTTCACTTCAAATTGATCAGTATTGGGATGGAACTACCAACAATCTTTTCTATGCAGCCAAAGAGTATCTCCCTACTAAAATATCCAACACTTACAAATCCCTCAAAGTTGGAAAATTACCCAAACATAACAACATAGTTCTAGCTTTTGATGGAAAACAAACAGTGGTAGATGAATTTGAAGACATCAAGGTTAAATGGAAGCTTGTTAAAAATTCTAACAATGATGATCTTTTTGACAATCCTAAAAAAGAATATAAGCATAAGTCATCAAAAGATTATGAGGAAAATGGGTTTGTGTTAAGTTTTGATGAGAAGCATAGAGATAAAGTAATGGAGAAGTATCTTCCACATGTTTTAAGAACTCATGAAGTTATAAAAGCAGGACAAAGAACTCTCAAGATTCATTCGATGCAATCGGGGCCATGGAAACAGAGTGATTTAACACACCCTGCTTCATTTGATTCACTTGCTTTAGAACCTGATCTAAAGAAAGCTATTATTGATGATTTAGATAGATTTTTGAAAAGGAAAACATTGTATAAAAAAGTTGGTAAGCCATGGAAACGTGGTTACTTATTGTATGGTCCACCAGGAACAGGAAAATCTAGTCTTATTGCTGCTATGGCAAAGTATTTGAAATTTGATGTTTATGATTTAGATCTAAGTTCTGTGTATTCTAACTCAGAACTCATGAGAGCCATGAGGGAGACATCTAACCAATCCATTATTGTTATTGAAGACATCGACTGCAACATAGAGGTTCTTGATCGATCAAAACCGGACAAGTACTCAGACTCTATCTCTGGCACTAAGGTGGTTAAGACTAAGAGCAAGCCTAGGCGGTTTACTCTATCCGGCTTGCTTAACTATATGGATGGACTGTGGTCAAGTTGCGGAGAGGAACGAATTTTGATATTTACTACAAACCATAAAGACAAAGTCGATCCAGCGTTGTTGCGCCCAGGACGTATGGACATGCATATTCATTTGTCATTTCTTAAAGCCAAGGCATTCAAAATCTTAGCTTCTAATTATTTGGACATTGAAGGAAATCATCAACCACTCCTTGAACAAATTGAAGAGCTATTGGAAAGAGTAGAGGTTACCCCTGCAGTAGTGGCAGAGCATTTGTTGAGAAGTGAAGATCCTAATGTTGCTCTCGAAGAAGTTATTAAATTTCTTCAAGAAATTGATGTTTCAAGAGTTGTTATGGATGAAGACTATAGTCAGCAACAATGTTCTGAGAACCAAATCGAACATCGAACTAGCAAGACCTCTAAGTTATGGTTCAACTGCTTTAAACTACTCGAATCAAAACAAAAACGCAATCGAAGTGCTAAAAAAACTAAATGA 1563 0.3596 MRSSMFGSFSSSFTNIGSSSSSWFELYASFSTFMMLLRTAINDLIPLRLRTFIISKLQSFFTNYQPNNQVSLQIDQYWDGTTNNLFYAAKEYLPTKISNTYKSLKVGKLPKHNNIVLAFDGKQTVVDEFEDIKVKWKLVKNSNNDDLFDNPKKEYKHKSSKDYEENGFVLSFDEKHRDKVMEKYLPHVLRTHEVIKAGQRTLKIHSMQSGPWKQSDLTHPASFDSLALEPDLKKAIIDDLDRFLKRKTLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYDLDLSSVYSNSELMRAMRETSNQSIIVIEDIDCNIEVLDRSKPDKYSDSISGTKVVKTKSKPRRFTLSGLLNYMDGLWSSCGEERILIFTTNHKDKVDPALLRPGRMDMHIHLSFLKAKAFKILASNYLDIEGNHQPLLEQIEELLERVEVTPAVVAEHLLRSEDPNVALEEVIKFLQEIDVSRVVMDEDYSQQQCSENQIEHRTSKTSKLWFNCFKLLESKQKRNRSAKKTK* 521
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1033 520 SMART AAA_5 257 404 IPR003593 -
Tpr2g1033 520 CDD AAA 258 401 - -
Tpr2g1033 520 ProSitePatterns AAA-protein family signature. 372 390 IPR003960 GO:0005524|GO:0016887
Tpr2g1033 520 Pfam Domain associated at C-terminal with AAA 45 139 IPR025753 -
Tpr2g1033 520 Pfam ATPase family associated with various cellular activities (AAA) 262 400 IPR003959 GO:0005524|GO:0016887
Tpr2g1033 520 Gene3D - 214 398 IPR027417 -
Tpr2g1033 520 PANTHER BCS1 AAA-TYPE ATPASE 16 472 - -
Tpr2g1033 520 Gene3D - 399 469 - -
Tpr2g1033 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 452 IPR027417 -
Tpr2g1033 520 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 16 472 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr2g1033 Tpr-Chr2 12185941 12188288 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1033 235 400 Calmodulin-binding Proteins AT3G56690 29.885 2.80e-11 64.3