Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1032 ATGAGAACTCCCATGTTTGGTTCTTTTTCTTCCTCATTTACAAACATTGGTTCATCATCATCATGGTTCGAGCTATATGCTACCTTTTCCACTTTCATGATGCTTTTAAGAACTGCAATCAATGATCTCATACCCTTAAAACTTAGAACTTTCATCATCTCAAAGCTACAATCTTTCTTCACAAATTACCAACCCAACAATCAAGTTTCACTTCAAATTGATCAGTATTGGGATGGAACTACCAACAATCTTTTCTATGCAGCCAAAGAGTATCTCCCTACTAAAATCTCCACAACTTACAAATCCCTCAAAGTTGGAAAATTATCCAAACATAACAACATAGTTATAGCTTTTGATGGAAAACAAACAGTGGTGGATAAGTTTGAAAACATCAAAGTTAAATGGAACCTTGTTGAAAAATCAAACAATGATGAGGAAAATGGGTTTGTGTTAAGTTTTGATGAGAAGCATAGAGATAAAGTAATGGAAAAGTATCTTCCACATGTTTTAAGCACTTATGAAGCTATAAAAGATGGACATAAAACTCTTAAGATACATTCTATGCAAAGTGGGCCATGGAAACAAAGTGATTTAAATCATCCTGCTTCATTTGATTCACTTGCTTTGGAACCTGATTTAAAAAAAGCTATTATTGATGATTTAGATCGGTTTTTGAGAAGGAAAAACTTGTATAAGAAAGTTGGTAAACCTTGGAAACGTGGGTACCTATTGTATGGTCCACCAGGAACAGGAAAATCTAGTCTTATTGCTGCTATGGCAAAGTATTTGAAGTTTGATGTGTATGATTTGGATCTAAGTTCTGTGCATTCTAACTCACAACTTATGAGAGCTATGAGAGAGACATCTAACAGATCTATCATTGTATTTGAAGACATTGATTGCAATTCTGAGGTGCTTGATCGATCAAAACCAGACAAGTTTGCAAATTTGGATTCAGATTCTGACTTAATTGATAAGGTGACAATGCCTAAAAGGTTTACTCTATCTGGTTTGCTTAACTATATGGATGGATTGTGGTCAAGTTGTGGAGAAGAAAGAATTTTGATATTTACAACAAACCATAAAGACAAAGTAGATTCGGCATTGTTGCGCCCGGGACGTATGGACATGCATATTCACTTGTCTTTTCTTAAAGCCAAGGCATTCAGAATCTTAGCTTCTAATTATTTGGACATTGAAGAACATCATCAGCCTCTCTTAGAACAGATTGATGAGCTATTGGAAAAAGTTGAGGTCACCCCTGCAGTAGTAGCAGAGTATTTGTTGAGAAATGAGGATCCTGATGTTGCTCTTAAAGAAATTGTTAAATTTCTTCAAGAACTTGACATTCCAAAAGTTATTGTGGATGAAGAATGA 1377 0.3486 MRTPMFGSFSSSFTNIGSSSSWFELYATFSTFMMLLRTAINDLIPLKLRTFIISKLQSFFTNYQPNNQVSLQIDQYWDGTTNNLFYAAKEYLPTKISTTYKSLKVGKLSKHNNIVIAFDGKQTVVDKFENIKVKWNLVEKSNNDEENGFVLSFDEKHRDKVMEKYLPHVLSTYEAIKDGHKTLKIHSMQSGPWKQSDLNHPASFDSLALEPDLKKAIIDDLDRFLRRKNLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYDLDLSSVHSNSQLMRAMRETSNRSIIVFEDIDCNSEVLDRSKPDKFANLDSDSDLIDKVTMPKRFTLSGLLNYMDGLWSSCGEERILIFTTNHKDKVDSALLRPGRMDMHIHLSFLKAKAFRILASNYLDIEEHHQPLLEQIDELLEKVEVTPAVVAEYLLRNEDPDVALKEIVKFLQELDIPKVIVDEE* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1032 458 Pfam ATPase family associated with various cellular activities (AAA) 243 381 IPR003959 GO:0005524|GO:0016887
Tpr2g1032 458 Pfam Domain associated at C-terminal with AAA 44 138 IPR025753 -
Tpr2g1032 458 CDD AAA 239 382 - -
Tpr2g1032 458 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 451 - -
Tpr2g1032 458 ProSitePatterns AAA-protein family signature. 353 371 IPR003960 GO:0005524|GO:0016887
Tpr2g1032 458 PANTHER BCS1 AAA-TYPE ATPASE 15 451 - -
Tpr2g1032 458 Gene3D - 194 379 IPR027417 -
Tpr2g1032 458 SMART AAA_5 238 385 IPR003593 -
Tpr2g1032 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 433 IPR027417 -
Tpr2g1032 458 Gene3D - 380 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1032 Tpr-Chr2 12182872 12184868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1032 212 381 Calmodulin-binding Proteins AT3G56690 28.652 1.96e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1032 - K08900 gmx:100787726 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1032 2 12182872 12184868 Tpr2g1032 2 12182872 12184868 ECH