Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1019 ATGGAGAAGACGCGACTAAATAACCTATTTCCTCTAACTCCAAGTTCCACATTCTCGACCAAGAAGGGACGGAGTGGATATGAACCATCAGACACGGAGACAGAGTGGCAAGATACTCCACGCTATGAACGAGGAGGAAGAAATAACGTAACTTTGAGTCCCGAAGAAACAAGAGTTACGTCTGTAAGGAACAAAAGTCCTATGACTCTCCACAAGAGACGCCTTTCAAGGTTTGAATTTGAAGTCCCGTCATCACCTTCAGTAACAGGTTCGGTTCTTAGCCAACCAAGAAGACGACACCACAGCAAGTCGCCCTATAGGCCACGCATAGCGCAGGATGATGGTAATAACGATGATGATTCTTTGTCATATATAACAGGTTTGAATTCACGTAGAAATACAAGTCCTTTGCCAAGACCTGACTTTGGAAGAACAGTGTCTCCTTATAACCGAACTCATGAACAAAGAACACCTTCGAATGAAAACAGAAAAGCAAGTTCGGGATTTCTGGAAGTGGATAGAGTGAGTACAAAACCAAACTACAGGAGAGCAGTGACTGCTCCAAGATTGAGGGACCAAGAACAAACATTGCAAAACACGAGAATGTTGAAACAAAGGGAAAAATCTCCTTTCAAAACAGGTCCAGTTAGAGAAAGAGAAATCAATGAAATGATAGCAGAAGTGAAGCTATCAAAAAATCCTACTGATGATTATTCATCAGCACTAGAAAGTACAGACTCAATTCAAACAGGTGATCTTTTCTTTTCTCGTGAATGCAATGCTTTGCAAGCGAAGAATTCTGCATTGCCTAAAAAAGTTCAACAATACGGGTATTTTAGCCCAAGACCAGTGATTACCGACATAAATCCCATTAGCAACCCCTCTGAAGTTAGGAGTAACCTCAATATGAATATGCCAAGAAATTCATCCAATGTGTTGTTGTCTCGAACAACGAGGGTCACATCAATCAGAAAGGGAAGTGGAACTGGGAAGACTCATACCAATCCTAGTGTAAAAAGTGATGCTAGTGCAAAAACAACTGACAGCATGAGGAAATTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTGCTTGTATGATGAGAACAGGAAACTGTAAGATTTCAAGAAAATCACCTGAACGTAAGCCAATTGACGAAGCTTCGTTGATTGAGAGAGCAATAATTGTGGAAAGCATTCCACAATTCTGGGCAGATAAACATCAACCAGCTTCACTAAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAACTAGTATCATCACAGGGCTCTTGTCCTCACATTTTACTTAAAGGACCCTCTAGTTCTGAGAAAGGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTCTAATGACAAAAGGACTATGAAAGTATCGGTTCCAATCACGTCCAGCTCTCATCACATGGAGCTCAATGTAAATTCAGAACCAAATGCCAAATATGCTTTGATGGGATTAATCAAAGAAATTAGCAATATATATGCAATTACCCCTGAAGTAAGCAATGCGAATTTCAAATCAGATTATAAAGTAATAATTCTTTACGAGGTCGACAAAGCTGTAGAGAACATCCAACACTTGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAGTTCTCTGCTGTGAAGATGATGAAAACATAATTGCACCTGTGAAAACCCGGTTCAAAGTTATCAATGTTGATGCTCCTCAAACTCATGAAATTATTGAGGCTCTTACTCAGATAGCAAATAAAGAGGAAATTGATCTATCCATGAATTTTGCTATGAAGATTGCTACAAAATCTAAGCAGAACCTCAGGGAAGCAATCTTGGCTCTTGAAACATGCAGAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCTGTTGGATGGGAGAAGATTGTAATAGAAGTTTCTGTAGAGATCCTAACTGATCCATCATTTTCACGCTTACTCTCAATACGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCCAGATTGATCCTCCTGAAACTTGTGGAGCAGCTCCTAAGAAAAACTGACGCTGGCTTAAAAAGGGAGCTCTACTACTGGCATGCTTATTATGTGAGTAATGACTTCTCCTCCTATAATTTGTCTTAA 2181 0.3966 MEKTRLNNLFPLTPSSTFSTKKGRSGYEPSDTETEWQDTPRYERGGRNNVTLSPEETRVTSVRNKSPMTLHKRRLSRFEFEVPSSPSVTGSVLSQPRRRHHSKSPYRPRIAQDDGNNDDDSLSYITGLNSRRNTSPLPRPDFGRTVSPYNRTHEQRTPSNENRKASSGFLEVDRVSTKPNYRRAVTAPRLRDQEQTLQNTRMLKQREKSPFKTGPVREREINEMIAEVKLSKNPTDDYSSALESTDSIQTGDLFFSRECNALQAKNSALPKKVQQYGYFSPRPVITDINPISNPSEVRSNLNMNMPRNSSNVLLSRTTRVTSIRKGSGTGKTHTNPSVKSDASAKTTDSMRKFTSNRKKNQKDAWFACMMRTGNCKISRKSPERKPIDEASLIERAIIVESIPQFWADKHQPASLNGFICNKQEAQLLKELVSSQGSCPHILLKGPSSSEKGELAMALLREIYGDACSNDKRTMKVSVPITSSSHHMELNVNSEPNAKYALMGLIKEISNIYAITPEVSNANFKSDYKVIILYEVDKAVENIQHLIKWIIDRYSDICKLVLCCEDDENIIAPVKTRFKVINVDAPQTHEIIEALTQIANKEEIDLSMNFAMKIATKSKQNLREAILALETCRAHNYPFSEEQPIPVGWEKIVIEVSVEILTDPSFSRLLSIRGKFQMLLLDFVHPRLILLKLVEQLLRKTDAGLKRELYYWHAYYVSNDFSSYNLS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1019 726 MobiDBLite consensus disorder prediction 117 136 - -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 323 350 - -
Tpr2g1019 726 Gene3D - 647 721 - -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 1 70 - -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 82 169 - -
Tpr2g1019 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 633 IPR027417 -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 26 42 - -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 8 25 - -
Tpr2g1019 726 Gene3D - 587 644 - -
Tpr2g1019 726 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 206 718 - -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 44 66 - -
Tpr2g1019 726 PANTHER OS02G0704966 PROTEIN 206 718 - -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 323 358 - -
Tpr2g1019 726 Gene3D - 404 585 IPR027417 -
Tpr2g1019 726 MobiDBLite consensus disorder prediction 148 166 - -
Tpr2g1019 726 SUPERFAMILY post-AAA+ oligomerization domain-like 647 715 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1019 Tpr-Chr2 12066881 12070234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1019 405 715 Core DNA Replication Machinery Family AT5G27740 37.846 3.74e-66 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1019 K10756 - gmx:100795321 894.034