Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1003 ATGGCTCGCCAGAGATTAACCCGAGAACCAAGATTACCACTACCGAGACTAGTGCTTCGAGCACCGATTCCTCCTTCGCCGAACGAAAATCAAACTCCGGCAGAGAACGATATCCTCACTCCGCTGAACGAAACTCCTACTCCGGAGACGGAAATCCACTACCGCGGTGTTCGGAAGTGGCCATGGGGACGATACGCCGCGGAAATCAGAGATCCTTCGAAGAAAGTGCAGGTTTGGCTAGGAACCTTCAATAATGCTTTGGAAGCCGCTAAAGCTTATGACGAAAAAGCGATTATGTTCCGCGGTGCTAAAGCAAAGACCAATTATCCAATGGATCTTGGGCCTATTTTATTCTCTAGGACCTATATTGATTCGTTGCATGTGACGGGACATGATCGTCTCAGATGTATTGGATGA 417 0.4844 MARQRLTREPRLPLPRLVLRAPIPPSPNENQTPAENDILTPLNETPTPETEIHYRGVRKWPWGRYAAEIRDPSKKVQVWLGTFNNALEAAKAYDEKAIMFRGAKAKTNYPMDLGPILFSRTYIDSLHVTGHDRLRCIG* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1003 138 Pfam AP2 domain 53 102 IPR001471 GO:0003700|GO:0006355
Tpr2g1003 138 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Tpr2g1003 138 SUPERFAMILY DNA-binding domain 53 112 IPR016177 GO:0003677
Tpr2g1003 138 MobiDBLite consensus disorder prediction 30 47 - -
Tpr2g1003 138 CDD AP2 53 110 IPR001471 GO:0003700|GO:0006355
Tpr2g1003 138 Gene3D AP2/ERF domain 53 112 IPR036955 GO:0003700|GO:0006355
Tpr2g1003 138 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Tpr2g1003 138 MobiDBLite consensus disorder prediction 17 50 - -
Tpr2g1003 138 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Tpr2g1003 138 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Tpr2g1003 138 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 40 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1003 Tpr-Chr2 11970809 11971225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1003 47 111 AP2-EREBP Transcription Factor Family AT5G44210 69.231 5.89e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr2g1003 AP2 3.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1003 K09286 - twl:119988254 105.916