Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0991 ATGGAAACAAACATGTCAACAACAACTTTAGGTTACAATAAAAATTCTTCTTCTTCTTCACCACCTCAACAAGTTCACACATTAATCTTCAATAATCAAACTCAAATTTCACATAATAATCTTCATCCAACAATCACAGATCCAGATCTAACCGTTACAACAACAATACCACCACCACCACCACCACCACCAGAACCACCACAACAACAACAGCAGGAACAAACAAAAACATGTTACCGTGAATGTCTGAGAAACCATGCTGCAAGCATGGGAAGCCACGTGGTAGATGGATGTGGAGAATTCATGCCAAGTGGTGAAGAAGGTTCACCACAATCCTTCGTATGCGCCGCTTGTAACTGTCACCGGAATTTCCATCGAAAACATTTTCAACAACTTCATCAACAACATCAACAACAAACACAAAATGTTCAAAATGTTGAAAATGTTCATAATGTTCATAATTTTCATACACCTTCATCATCATCACAAAGATTTTCACATGCTAATTCACAACAAGCAATTATTGTTCCACCTTTGATGATGAATTTTGGATCAGGAGCAGCAGAATCATCAAGTGAAGATCTAAATATCTCAGGTGGAGAATTTTCAATTCAGAATCAGCAGAAGAAACCGGCGTTGAAGAAGCGGATAAGGACGAAATTCTCGCAGGAACAAAAGGATAAGATGATGGAGTTTGGTGAAAAAATTGGATGGAAGATTCAGAAACATGATGAACATGAAGTTCAACAGTTTTGTTCACAAGTTGGTATTAAGAGACAAGTTTTTAAAGTTTGGATGCATAATAACAAACAAGCTATGAAGAAACAACAACAACAACAACAACAAATGTAA 852 0.3674 METNMSTTTLGYNKNSSSSSPPQQVHTLIFNNQTQISHNNLHPTITDPDLTVTTTIPPPPPPPPEPPQQQQQEQTKTCYRECLRNHAASMGSHVVDGCGEFMPSGEEGSPQSFVCAACNCHRNFHRKHFQQLHQQHQQQTQNVQNVENVHNVHNFHTPSSSSQRFSHANSQQAIIVPPLMMNFGSGAAESSSEDLNISGGEFSIQNQQKKPALKKRIRTKFSQEQKDKMMEFGEKIGWKIQKHDEHEVQQFCSQVGIKRQVFKVWMHNNKQAMKKQQQQQQQM* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0991 283 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 214 271 IPR006455 -
Tpr2g0991 283 Pfam ZF-HD protein dimerisation region 77 128 IPR006456 -
Tpr2g0991 283 SUPERFAMILY Homeodomain-like 206 275 IPR009057 -
Tpr2g0991 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 21 276 - -
Tpr2g0991 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 276 - -
Tpr2g0991 283 Gene3D - 200 276 - -
Tpr2g0991 283 MobiDBLite consensus disorder prediction 1 23 - -
Tpr2g0991 283 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 79 128 IPR006456 -
Tpr2g0991 283 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 79 128 IPR006456 -
Tpr2g0991 283 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0991 Tpr-Chr2 11867073 11869630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0991 76 276 ZF-HD Transcription Factor Family AT2G18350 51.185 1.69e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Tpr2g0991 ZF-HD_dimer 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0991 - - mtr:MTR_5g020510 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0991 2 11867073 11869630 Tpr2g0991 2 11867073 11869630 ECH