Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0966 ATGTCTACCCCTGATAACGCCACACCGGATAATGCCACCCCTGACAATAGTACCCCTGACAATAGCACCCCTGACAATAGTACCCCTGACAATAGTACCCCTGATGACGCCGATAACTCTGATTCACAACCACCACCTTCAGAATCACCACCAGAATCACCACCACCATCACCGCCTTCAGATTCCCCGCCGCCTCCTTCACAATCACAACCTTCTCCTCCACCACCTACATCAAACAATCCATCCCCACCATCACCCAATGGAGCGGTTCATTCTTCACCACCACCTCCACACAAATCATTACCAAAGATTCAAACCGAAAGCGAAACCTTGTATGATAATGGAAACTCCAACAACAATAACAATGATAGTACCAACAATGATAATACCAATAAGGCATTAATTGGAGCCGTGCTTGGGGTGGGGGCAGTTCTTCTCATTTTGGTTGTCGTCTGCCTTGTTTGCTCCAGGAAGAAGAAAAGAAAGCAAACATACTATTATGGAGATCACCCATCTCGTGCACAAGGGAATAGTAACTATTACAACAATGAGCCGAACCCAAATTACTACGGAGGTCCACATGGGGATCATGTTGTTAGGCTACAAAATGGAATGGGTCCTGGTGGAATGGGTCCTAGTGGAATGGGTCCTAATGGTGGTGGTGGTGGTTGGGGTGCACCACCACCTCCTCCTAACCTAATGAACAGTGCAGACATGAGCTCAAATTACTCAACTGGACCACCACCTTTGCCTCCTCCTTCACCAACCCTTGCTTTAGGGATTAAAGGAGGCACATTCACTTATGAGGAATTGGCAGCTGCAACCAATGGATTCATTGAGTCAAATTTGATAGGACAAGGTGGTTTTGGTTATGTCCATAAGGGTGTTTTACCTAGTGGAAAGGAAATAGCTGTCAAGAGTTTAAAAACGGGTAGCGGACAAGGAGAACGAGAGTTCCAAGCCGAGATTGACATCATTAGTCGTGTTCATCATCGTCATCTTGTTTCACTTGTTGGATACTGTATATCTGGTGGCCAAAGAATGTTGGTCTATGAATTTATTCCAAATAACACTATGGAATATCATCTTCATGGAAAAGGTCGACCTACTATGGATTGGCCAACTAGAATGAGGATTGCAATAGGTTCTGCTAAAGGGCTTGCTTATCTTCATGAAGATTGCCATCCTCGCATCATCCATCGTGATATCAAAGCTGCAAATGTCCTTATTGATGACAGCTTTGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACAACGGATAATAATACTCATGTATCAACTCGTGTCATGGGAACATTCGGGTACCTAGCTCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTTGTAACTGGGAAGCGACCTGTGGATGCCTCAATTACCATGGATGACAGCTTAGTGGACTGGGCTCGACCACTATTGACTCATGGACTAGAGGATGGAAACTTTGGTGAGTTGGTGGATCCATTTTTGGAAGGAAACTACAATCCTCAAGAACTCGCTAGAATGGCAGCTTGTGCTGCCGCTAGCATTCGTCACTCTGCCAAGAAACGTCCTAAAATGAGCCAGATTGTGAGAACATTGGAAGGAGATGTCTCGTTGGATGACTTGAAGGACGGAATTAAGCCAGGGCACAACACTGTTTACACCTCTTCATCAGGTAGCTCAGAGTATGACACAATGCAGTACAACGCTGATATGCTGAAGTTCAGAAATGCAGTGTTTAACAGTAACAGCAATGACTTTGGCACCAGCAGTTTCTCCAGTGGCGATATGAACCCAACACCAAAGGCGAGACCGCCACAACCATTGCTTTAA 1884 0.4506 MSTPDNATPDNATPDNSTPDNSTPDNSTPDNSTPDDADNSDSQPPPSESPPESPPPSPPSDSPPPPSQSQPSPPPPTSNNPSPPSPNGAVHSSPPPPHKSLPKIQTESETLYDNGNSNNNNNDSTNNDNTNKALIGAVLGVGAVLLILVVVCLVCSRKKKRKQTYYYGDHPSRAQGNSNYYNNEPNPNYYGGPHGDHVVRLQNGMGPGGMGPSGMGPNGGGGGWGAPPPPPNLMNSADMSSNYSTGPPPLPPPSPTLALGIKGGTFTYEELAAATNGFIESNLIGQGGFGYVHKGVLPSGKEIAVKSLKTGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFIPNNTMEYHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELVTGKRPVDASITMDDSLVDWARPLLTHGLEDGNFGELVDPFLEGNYNPQELARMAACAAASIRHSAKKRPKMSQIVRTLEGDVSLDDLKDGIKPGHNTVYTSSSGSSEYDTMQYNADMLKFRNAVFNSNSNDFGTSSFSSGDMNPTPKARPPQPLL* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0966 627 SMART serkin_6 278 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0966 627 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Tpr2g0966 627 Pfam Protein tyrosine and serine/threonine kinase 282 549 IPR001245 GO:0004672|GO:0006468
Tpr2g0966 627 SUPERFAMILY Protein kinase-like (PK-like) 255 550 IPR011009 -
Tpr2g0966 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Tpr2g0966 627 PANTHER RECEPTOR-LIKE KINASE 44 614 - -
Tpr2g0966 627 Gene3D Transferase(Phosphotransferase) domain 1 354 561 - -
Tpr2g0966 627 MobiDBLite consensus disorder prediction 606 627 - -
Tpr2g0966 627 ProSiteProfiles Protein kinase domain profile. 278 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0966 627 MobiDBLite consensus disorder prediction 1 103 - -
Tpr2g0966 627 MobiDBLite consensus disorder prediction 1 43 - -
Tpr2g0966 627 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 44 614 - -
Tpr2g0966 627 MobiDBLite consensus disorder prediction 204 256 - -
Tpr2g0966 627 Gene3D Phosphorylase Kinase; domain 1 258 353 - -
Tpr2g0966 627 MobiDBLite consensus disorder prediction 44 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0966 Tpr-Chr2 11589475 11595086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0966 132 613 Trihelix Transcription Factor Family AT1G70460 50.410 1.26e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Tpr2g0966 PK_Tyr_Ser-Thr 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0966 - - gmx:100777163 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0966 2 11589475 11595086 Tpr4g4146 4 48465700 48469902 PCT