Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0954 ATGACAAAAGAAAATCCACACTCACTACCAACCTCAGACACAGTACGGCACCCTATTCGAGACATTAGAAGTGTTGATGATGATGATGATGGTTTTGTCTTTCATATTGATCGTAGTTTGCTTTTGGATTATACGAAATTAGTCGTTGGTGACTTGATCGGAAAAGGGGGGAACTCAAATGTATACAATGGATGGTATGAAGATCGTCCTGTTGCTATTAAGAAGGTTTTACTCCCAGAAACAACAGATGAAGCTACACTAGAATGTAAGGCAAATTTTCAGAGGGAGGTTAACCTGTTATCTAAGATTGAACATAAAAATGTTATCAAGTTTGTTGCAGCCTCTGATGGACCAATGATTTTAATCACTGAACTTATGGAAGGTGGTTCTCTTCAGAAACATCTGAAGAACATTTATCCAATAACTCTTAGTTTGGAACAATGTTTAAGTTATGCTCTTGATATTTCACAAGCTATGGAATATTTGCATGCAAATGGCATTATTCACCGTGACCTCAAGCCTGGTAATATACTGCTTACAAAAGACCAGAATCATGTTAAACTTGCTGATTTTGGGCTTGCTAGAGATGATATATGTGATGAGATGACTTGTGAAGCTGGTACTTATCGATATATGGCTCCTGAGCTAATGAGCAAAAATCCACTTCCAAAAGGAGCAAAGAAAAGCTATGATCATAAGGCAGATGTGTACAGTTTTGCACTAACTCTCTGGTCTTTGATCAAAAATCAAATTCCTTTCAAAGATCGGAAAGACTTAATGGCTGCTTATGCTACTATGAATAATATAAGGCCAAGTTTGGATGAATTTCCTGAAGAGATAGTTCCTCTGCTGCAATCCTGTTGGGTGGAAGATCCAAAACTCAGACCGGAATTTAAGGAAATCACTGGAACACTGATAAGGATTCTCCAAAATATTTACACAACAAAGATCAATGCTCTTGCTAGCATTAAACAGGATGTCGAAGCTAATGGAGAAAGTGAGGCAGAGTCCTCAAAGGAAAATAAAAACCTTCTCAAACGTGATGTCGAAGCTAATGGAGAATCTGATAACATAATTGCTCAGTATCCTAGGATGGATGAAAAGAAACTCAAGAACAAAAGCAAATTCAAACGCTTTATTTCTTACTTCCGCAGTTGTATTGCTTTTTAA 1170 0.3718 MTKENPHSLPTSDTVRHPIRDIRSVDDDDDGFVFHIDRSLLLDYTKLVVGDLIGKGGNSNVYNGWYEDRPVAIKKVLLPETTDEATLECKANFQREVNLLSKIEHKNVIKFVAASDGPMILITELMEGGSLQKHLKNIYPITLSLEQCLSYALDISQAMEYLHANGIIHRDLKPGNILLTKDQNHVKLADFGLARDDICDEMTCEAGTYRYMAPELMSKNPLPKGAKKSYDHKADVYSFALTLWSLIKNQIPFKDRKDLMAAYATMNNIRPSLDEFPEEIVPLLQSCWVEDPKLRPEFKEITGTLIRILQNIYTTKINALASIKQDVEANGESEAESSKENKNLLKRDVEANGESDNIIAQYPRMDEKKLKNKSKFKRFISYFRSCIAF* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0954 389 SUPERFAMILY Protein kinase-like (PK-like) 36 313 IPR011009 -
Tpr2g0954 389 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 25 340 - -
Tpr2g0954 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Tpr2g0954 389 PANTHER SERINE-THREONINE PROTEIN KINASE 25 340 - -
Tpr2g0954 389 SMART serkin_6 47 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0954 389 CDD STKc_MAP3K-like 53 305 - -
Tpr2g0954 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Tpr2g0954 389 Pfam Protein kinase domain 50 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0954 389 PRINTS Tyrosine kinase catalytic domain signature 123 136 IPR001245 GO:0004672|GO:0006468
Tpr2g0954 389 PRINTS Tyrosine kinase catalytic domain signature 161 179 IPR001245 GO:0004672|GO:0006468
Tpr2g0954 389 PRINTS Tyrosine kinase catalytic domain signature 234 256 IPR001245 GO:0004672|GO:0006468
Tpr2g0954 389 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Tpr2g0954 389 Gene3D Transferase(Phosphotransferase) domain 1 37 348 - -
Tpr2g0954 389 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0954 Tpr-Chr2 11522816 11527558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0954 29 363 MAP Kinase Kinase Kinase AT5G66710 45.104 1.50e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tpr2g0954 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0954 - K04427 gmx:106796450 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0954 2 11522816 11527558 Tpr2g0954 2 11522816 11527558 ECH