Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0919 ATGGGTTGGTTTACCAAGTTTCTCAATGGCTCTAATCATAGAATTTCAAGAGGACAATACAATGGCAAACATGGTGATGATAGAGTCTGGGATAATCATCACAGTTCAGTGGATGATTTGACTGATGTCGAGAAAGAAGACATCGACCGTGCAATTGCACTGTCTCTGTCAGAGGAGGATCTGAAAGGGAAAAAAGTAGTTGTTGAGGACGACTCTCAGTCTGAAGAAGACGAACCACTTTGTAAAATTGACGAGGAAAATGACAATGTTGGTAAAATTCGACCAGATGAAGATGAACTGCTGCTAGCTAAAATTCAGCAGGATGAAAATCAACGACGTGCCAAAGATCAACTTGAGGAAGATGAGCAACTTGCAAAGGCAATTCAATTAAGTTTGGCCATTGATTCTCCTCATCGACATGGCAATGATTCTTTATCTCAACCCTCTCCCAACGTCTTTCCACCTGGATTCAGAATCTGTGCTGGATGCAATGCTGAGATTGGCCATGGTAGATTTTTAAGTTGCATGGGAGGCGTCTGGCATCCACAATGCTTTGTCTGTCATGCTTGCCATTTGCCAATCACTGATTATGAGTTTTCTATGTCTAGCAAACGTCCATACCATAAATCCTGCTACAAGGAGAAGCATCATCCAAGATGCGATGTTTGCAAGAATTTTATCCCAGCTAATTCAGCTGGACTCATTGAGTATAGAGCTCATCCTTTCTGGATACAAAAATACTGCCCATCACATGAGCTCGACCGCACTCCTCGTTGTTGTAGCTGTGAAAGAATGGAGCCAAAGGATTCAAAATATCTTTTGCTTGATGATGGTCGAAAACTATGTCTCGAGTGTCTAGACTCAGCAATTATGGATAGTCATGAATGTCAACCTCTGTACCTTGAAATACTAGAATTTTATGAAGGTTTAAATATGAAATTGGAGCAACAAGTTCCTATGCTTTTGGTTGAGAGACAAGCACTGAATGAGGCCATGGAGGGAGAAAAGAACGGTCATCACCATTTACCTGAAACTAGAGGACTGTGCTTGTCAGAAGAACAAACTGTCACCACCATTTTGAGAAGACCAAGGATAGGGGCAGGACACCGTGCCACTGACATGATAACCGAGCCTTATAAACTGACACGTCGATGTGAAGTGACAGCCATTCTTGTTTTGTATGGCCTTCCTAGGTTGTTGACAGGATCAATCCTAGCTCATGAGATAATGCATGCATGGCTCAGACTTAAAGGTTATCCCAACCTTAGTCCAGAAGTTGAAGAAGGAATTTGCCAAGTCTTGGCTCATATGTGGTTAGAATCAGAGCTCTATTCTGGATCTGGGAATAGTAATGCACCGTCTTCGTCTTCATCTTCGTCATCGGCTATGCCTCCAACCGCTTCTGCATCATCGAAGAAGGGTAAACGGTCTGATTTTGAGAAGAAACTTGGCGGGTTTTTCATACACCAGATTGAGTCAGATACCTCGTCGGCCTATGGAGATGGGTTCAGATTTGGTAACCAGGCAGTACTTAAGTATGGGCTCAAAAGTACCCTTGATCATATCCATTTGACAGGAACTTTTCCATGTTGA 1593 0.4262 MGWFTKFLNGSNHRISRGQYNGKHGDDRVWDNHHSSVDDLTDVEKEDIDRAIALSLSEEDLKGKKVVVEDDSQSEEDEPLCKIDEENDNVGKIRPDEDELLLAKIQQDENQRRAKDQLEEDEQLAKAIQLSLAIDSPHRHGNDSLSQPSPNVFPPGFRICAGCNAEIGHGRFLSCMGGVWHPQCFVCHACHLPITDYEFSMSSKRPYHKSCYKEKHHPRCDVCKNFIPANSAGLIEYRAHPFWIQKYCPSHELDRTPRCCSCERMEPKDSKYLLLDDGRKLCLECLDSAIMDSHECQPLYLEILEFYEGLNMKLEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPRIGAGHRATDMITEPYKLTRRCEVTAILVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLSPEVEEGICQVLAHMWLESELYSGSGNSNAPSSSSSSSSAMPPTASASSKKGKRSDFEKKLGGFFIHQIESDTSSAYGDGFRFGNQAVLKYGLKSTLDHIHLTGTFPC* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0919 530 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 119 132 IPR003903 -
Tpr2g0919 530 MobiDBLite consensus disorder prediction 449 472 - -
Tpr2g0919 530 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 1 529 - -
Tpr2g0919 530 Pfam LIM domain 160 215 IPR001781 -
Tpr2g0919 530 Pfam Protein DA1 309 524 IPR022087 -
Tpr2g0919 530 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 152 185 - -
Tpr2g0919 530 ProSitePatterns LIM zinc-binding domain signature. 160 194 IPR001781 -
Tpr2g0919 530 SMART lim_4 159 211 IPR001781 -
Tpr2g0919 530 Gene3D Cysteine Rich Protein 155 217 - -
Tpr2g0919 530 SMART uim 119 138 IPR003903 -
Tpr2g0919 530 SMART uim 43 62 IPR003903 -
Tpr2g0919 530 ProSiteProfiles LIM domain profile. 158 218 IPR001781 -
Tpr2g0919 530 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 187 241 - -
Tpr2g0919 530 CDD LIM_DA1 160 212 - -
Tpr2g0919 530 PANTHER PROTEIN DA1-RELATED 2 1 529 IPR045218 -
Tpr2g0919 530 MobiDBLite consensus disorder prediction 449 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0919 Tpr-Chr2 11170183 11175813 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g0919 DA1-like 7.7e-103 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0919 - - gmx:100817969 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0919 2 11170183 11175813 Tpr2g0919 2 11170183 11175813 ECH
Tpr2g0919 2 11170183 11175813 Tpr4g4120 4 48167683 48171866 PCT