Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0918 ATGGGAATAGCAACTCCTTCTTCTTCTTCTTCTTCTTCCATTATTCACTTGAAGACATATCATAACCATAAACATAACCAAGAAAAGTTGAAATATTGTTCAAATTCTATGTCCCAAGATTATCAGCAAACAATCTTCGGCTTCTCCTCGAATGGATTCGAGAGATCATCGTCGCAGCAGCAACAACAACAACAGATCCATAGGGATAAAGTAAGGATGCTACAAGGGTTTAATTCAGCACAATTAATAGAAGGAGAACAAGAGGAAGAAAGAGGAGGCGTGTATGAAACAACAGGTATGTTATCAGAGATGTTTAATTTTGCTGATCCTTCAACCACAGCTGAATTGTTAGGAACCGCGAGTTTTCGTAATTCTTCTTCTTCAAGACAGCAAGAAAATCAACAACAAACAACATCGGAAAATAACAACTGGTATGGTAATAGTAGACAAGGGATGCAGCAGCAGCATCAGCAGCAGATGTCAAACATTAACGCAGCTGCTGCTGATTCAGCTGCTGCTATGCATCTTTTTCTCATGAACCCTACTCAAACAACATCATCATCTTCCCCTCCTCATCAAAATTCTTCAACTCTTCACATGTTACTACCTAACCCTCCCTCTAATAATTCCTTACAAGGTTTTCCAAATTCCGGTAATTTTGGACAATTTACATCATGGGGTAGTACTAGTAGTACTACTCAAGAAGGTCAAGGTCATGGACAAGGTCAAGGTCTTTCATTATCACTATCTTCTTCATTGCAAGCTGCAAAAGCTGAGGAAGAATTGAGAATGGGAGGAGGAGGAGGAGAAAGTGGTAATTTTATGTATAATAATTACATTAATATTCAAGGTGGAGGAGGAGGAGGAGGAGGAGGACCATCTTCATCATCATATCCTCCGTACAAATTAAATCATCAACAAGCATTGAATTTACAAATGCAAGGAGGAGGAGGAGGGACCAATATTGGAGGATATCAATTATTACAAAGTCATCAAGGATTGGGAAGTGTAGTAAATGTTTTAAGAAATTCAAAATATATGAAAGCAACTCAAGAATTGCTTCAAGAATTTTGTAGTGTTGGGAGAGGCCATTTTATTAAGAAGAACAAGTTTAATTCAAACCCTAATAATAATTCCTCCTCCAATGTTGCTGGTGGTGATAACATTCCTTCATCTTCATCAAAAGATAATCCTCCTCTTCCTTTGTCAGCTGGTGATAGGATTGAGCATCAAAGAAGGAAGGTCAAACTTCTAGCCATGCTTGATGAGGTGGATAGGAGATACAATCACTATTGTGAACAAATGCAAATGGTAGTGAACTCATTTGATCTAATGATGGGTTTTGGAGCAGCAGTTCCATACACATCACTAGCTCAAAAAGCGATGTCTCGACATTTCCGGTGTTTAAAGGATGCAATACAAGTACAACTGAAGCAAAGTTGTGAGTTACTTGGAGAGAAAGAAGGTGCAGGAGGAGGCTTAACAAAAGGAGAGACCCCTAGACTTAAGGTACTTGAACAAAGCTTAAGACAACAAAGAGCATTTCATCAAATGGGTATGATGGATCAAGAAGCTTGGAGACCTCAAAGAGGATTGCCTGAACGTTCTGTCAATGTTTTGAGAGCTTGGCTTTTTGAGCATTTTCTACACCCGTATCCAAGTGATGCAGATAAGCATCTATTGGCACGACAAACTGGGCTATCAAGAAATCAGGTATCAAACTGGTTCATAAATGCTAGGGTTCGGTTGTGGAAACCTATGGTGGAAGAGATGTACCAACAAGAACTTAATGAAGCAGAGTGTGCAGCAGAAGACGGAGAAAGAAACCAAAGCAACAACAACAGTGGCAACCAAACACAAACACCGCCAACATCATCAGCAACAGAACCACCAACACCAACAAGAAAAAGATCTAATATCAATCCTCAAGAAAACGACCCTTCATTAGTTTCAATCAATGGACAACAATCCTTCTCCGAAAATCAAGCAATGCAATCCACCACGGTCAATGCCACCGTTTCTGAGGTGGTTCCACCCTTTGATTCAGACATGCCCCCACAACGATCGATGGCGATAGATGATGTGAATCGATATGGCAGCTTAGTTGCAGAGGATTATGAGACAGGCTCTATTAGTGCTGACATTGGATCATCAACTCTTATTAGATTCGGGCCCACTACCGGTGATGTGTCACTCACATTAGGGTTACGCCACGTCGGGAATGTGCCCGATGAAACAAATTTTTCTATTAGAGACTTTGGAAGCATGTAG 2271 0.4025 MGIATPSSSSSSSIIHLKTYHNHKHNQEKLKYCSNSMSQDYQQTIFGFSSNGFERSSSQQQQQQQIHRDKVRMLQGFNSAQLIEGEQEEERGGVYETTGMLSEMFNFADPSTTAELLGTASFRNSSSSRQQENQQQTTSENNNWYGNSRQGMQQQHQQQMSNINAAAADSAAAMHLFLMNPTQTTSSSSPPHQNSSTLHMLLPNPPSNNSLQGFPNSGNFGQFTSWGSTSSTTQEGQGHGQGQGLSLSLSSSLQAAKAEEELRMGGGGGESGNFMYNNYINIQGGGGGGGGGPSSSSYPPYKLNHQQALNLQMQGGGGGTNIGGYQLLQSHQGLGSVVNVLRNSKYMKATQELLQEFCSVGRGHFIKKNKFNSNPNNNSSSNVAGGDNIPSSSSKDNPPLPLSAGDRIEHQRRKVKLLAMLDEVDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTSLAQKAMSRHFRCLKDAIQVQLKQSCELLGEKEGAGGGLTKGETPRLKVLEQSLRQQRAFHQMGMMDQEAWRPQRGLPERSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELNEAECAAEDGERNQSNNNSGNQTQTPPTSSATEPPTPTRKRSNINPQENDPSLVSINGQQSFSENQAMQSTTVNATVSEVVPPFDSDMPPQRSMAIDDVNRYGSLVAEDYETGSISADIGSSTLIRFGPTTGDVSLTLGLRHVGNVPDETNFSIRDFGSM* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0918 756 MobiDBLite consensus disorder prediction 606 646 - -
Tpr2g0918 756 Gene3D - 529 591 - -
Tpr2g0918 756 MobiDBLite consensus disorder prediction 370 408 - -
Tpr2g0918 756 CDD homeodomain 526 587 IPR001356 GO:0003677
Tpr2g0918 756 MobiDBLite consensus disorder prediction 603 646 - -
Tpr2g0918 756 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 82 745 - -
Tpr2g0918 756 MobiDBLite consensus disorder prediction 370 399 - -
Tpr2g0918 756 Pfam Homeobox KN domain 543 582 IPR008422 GO:0003677|GO:0006355
Tpr2g0918 756 Coils Coil 589 609 - -
Tpr2g0918 756 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 82 745 - -
Tpr2g0918 756 Pfam Associated with HOX 340 473 IPR006563 -
Tpr2g0918 756 MobiDBLite consensus disorder prediction 228 252 - -
Tpr2g0918 756 SMART HOX_1 526 590 IPR001356 GO:0003677
Tpr2g0918 756 SMART prehox3 335 475 IPR006563 -
Tpr2g0918 756 ProSiteProfiles 'Homeobox' domain profile. 523 586 IPR001356 GO:0003677
Tpr2g0918 756 SUPERFAMILY Homeodomain-like 528 593 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0918 Tpr-Chr2 11142968 11152742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0918 1 573 Homeobox Transcription Factor Family AT4G36870 49.048 9.61e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tpr2g0918 POX 3.6e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0918 - - ccaj:109799862 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0918 2 11142968 11152742 Tpr2g0918 2 11142968 11152742 ECH
Tpr2g0918 2 11142968 11152742 Tpr4g4119 4 48106989 48117366 ECH
Tpr2g0918 2 11142968 11152742 Tpr4g4119 4 48106989 48117366 PCT