Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0899 ATGGCTGACTCCAGTCCAACTGCATCTACTTCTAATGGCACCCCCACATATTCTTGTTTCCAACGAACGGTTACTCTATACGATTGGTGGCTTGTTAAATCTCAAAAAGACTTCCAAGGGAAGTGTGTAGCCATCTCTGGCATCTCTTCCAGAAAGGAAGAAGCGGTCCGTATATTCAATTCTGCTCCTATTATCAAAAGATATGATGAGTTTTCCCTTGAGACTGCCGATGGTATATATGTTCTCATCAGGGGTTTCATCCACAAGCAACACACGCTGGATAATGGTTTTACTTCCGAGATTTTCAAGAGTTTTTTATTCGGCTTTCCTCAAAACTGGGAAAGTTGTGCTCTAGGTTGCTTCAGAGAAGAAGCAGAAGTTGGTGCTTATTCGGTCAATGTTGTTATGGATAATGTATCTGCAGGTTTTGAAGAAATCTCGGCTGACGGTGAGGAAAAATCCATTCCTACTTCGTTGATATTGCCTGAAGAGGCCCCAGAAAATTGCAAGACACCATTCCTTGGAGATGGATGCAAAGTCTCAAAGGGGTTGAGTGGGATAGATGTTGCTTGTGGTAGGGGTGGAAATAGGCGTAGTAGCAGGTTGCATAATATTAATGCGTATCAGCGGAAGAAGCATAAGAAGCAGCATGCATCTAGAAGTCCTCTCAAGTGTCCCGATGAAGAACCGAGCTATACCTCCAAGGCCGTGGAAAATTGTAATTCGGATACTGCTGTGCTTGATAATGTATCAGCAAATCTTCTAGAAATCCCATCTGATGCCGTGGAAAATTCTTTCCCTACGTCTTTGGTAACCCCGGAAAAGGCCATGGAAGATTGCAATAAGTTATTCCTTGAAGATGAACACGATATGTCAATTAAGACGGGTGAGGTCAATGTTGTTCATGGTAGTGGTGTGAATAGACGTAGTGCCCGGTTGCATAATGTTAAACTCTACCAGAAGAAGCAACCTGCTATTGGAGGTCCTGCAACACATCCTGATAAAGACCAGACCTCTGCCTCAGCTGCTTTGGAGAAGAGTGATGGAAGGTCGGAAACTCTATCAACACCCGTTCAATCACAAAAGGGAATAGTAAACACATTATCTGGGCAGGTCTCTAATAAATCCAGATCCAGAATTTCCAAAACTCCTTCAGCAAAAACTGAAGGATGTTATAAGAAAAAAAGGGTGACGGTTGAAAGAGAAGCTGTCCGGCCTAAGAGAAAAATTATTAAATCCGCATCTTCTGTAAAATCTCCACAAGGAAGTGATGTTAGTCCACTGAACAAGGGAAGTAAACAGAGATTATCCACAATGTCTCCGGAGTCCTTGAGTCTCAAAAAATCTAGATCTGGTAGGTTACTTATACCTCCCTTGGAGTTTTGGCGCAATCAAATACCTATTTTTAATAGGGACCATGAAATTACTGGAATTCAGGAAGGCTCGTCTTTGATATCACCTTTTAGAGGCATTTCACCATCATTGGGCAGGTTTTGA 1497 0.4242 MADSSPTASTSNGTPTYSCFQRTVTLYDWWLVKSQKDFQGKCVAISGISSRKEEAVRIFNSAPIIKRYDEFSLETADGIYVLIRGFIHKQHTLDNGFTSEIFKSFLFGFPQNWESCALGCFREEAEVGAYSVNVVMDNVSAGFEEISADGEEKSIPTSLILPEEAPENCKTPFLGDGCKVSKGLSGIDVACGRGGNRRSSRLHNINAYQRKKHKKQHASRSPLKCPDEEPSYTSKAVENCNSDTAVLDNVSANLLEIPSDAVENSFPTSLVTPEKAMEDCNKLFLEDEHDMSIKTGEVNVVHGSGVNRRSARLHNVKLYQKKQPAIGGPATHPDKDQTSASAALEKSDGRSETLSTPVQSQKGIVNTLSGQVSNKSRSRISKTPSAKTEGCYKKKRVTVEREAVRPKRKIIKSASSVKSPQGSDVSPLNKGSKQRLSTMSPESLSLKKSRSGRLLIPPLEFWRNQIPIFNRDHEITGIQEGSSLISPFRGISPSLGRF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0899 498 MobiDBLite consensus disorder prediction 334 385 - -
Tpr2g0899 498 MobiDBLite consensus disorder prediction 209 230 - -
Tpr2g0899 498 MobiDBLite consensus disorder prediction 388 409 - -
Tpr2g0899 498 MobiDBLite consensus disorder prediction 323 444 - -
Tpr2g0899 498 Pfam SANTA (SANT Associated) 24 115 IPR015216 -
Tpr2g0899 498 PANTHER MIS18-BINDING PROTEIN 1 4 489 IPR039110 -
Tpr2g0899 498 MobiDBLite consensus disorder prediction 414 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0899 Tpr-Chr2 10956776 10963681 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g0899 SANTA 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0899 - - gmx:100790080 476.478