Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0898 ATGGCTGACTCCAGTCCAACTGCATCTACTTCTAATGGCACCCCCACATATTCTTGTTTCCAACGAACGGTTACTCTATACGATTGGTGGCTTGTTAAATCTCAAAAAGACTTCCAAGGGAAGTGTGTAGCCATCTCTGGCATCTCTTCCAGAAAGGAAGAAGCGGTCCGTATATTCAATTCTGCTCCTATTATCAAAAGATATGATGAGTTTTCCCTTGAGACTGCCGATGGTATATATGTTCTCATCAGGGGTTTCATCCACAAGCAACACACGCTGGATAATGGTTTTACTTCCGAGATTTTCAAGAGTTTTTTATTCGGCTTTCCTCAAAACTGGGAAAGTTGTGCTCTAGGTTGCTTCAGAGAAGAAGCAGAAGTTGGTGCTTATTCGGTCAATGTTGTTATGGATAATGTATCTGCAGGTTTTGAAGAAATCTCGGCTGACGGTGAGGAAAAATCCATTCCTACTTCGTTGATATTGCCTGAAGAGGCCCCAGAAAATTGCAAGACACCATTCCTTGGAGATGGATGCAAAGTCTCAAAGGGGTTGAGTGGGATAGATGTTGCTTGTGGTAGGGGTGGAAATAGGCGTAGTAGCAGGTTGCATAATATTAATGCGTATCAGCGGAAGAAGCATAAGAAGCAGCATGCATCTAGAAGTCCTCTCAAGTGTCCCGATGAAGAACCGAGCTATACCTCCAAGGCCATGGAAAATTGTAATTCGGATACTGCTGTGCTTGATAATGTATCAGCAAATCTTCTAGAAATCCCATCTGATGCCGTGGAAAATTCTTTCCCTACGTCTTTGGTAACCTCGGAAAAGGCCATGGAAGATTGCAATAAGTTATTCCTTGAAGATGAACACGATATGTCAATTAAGACGGGTGAGGTCAATGTTGTTCATGGTAGTGGTGCGAATAGACGTAGTGCCCGGTTGCATAATGTTAAACTCTACCAGAAGAAGCAACCTGCTATTGGAGGTCCTGCAACACATCCTGATAAAGACCAGACCTCTGCCTCAGCTGCTTTGGAGAAGAGTGATGGAAGGTCGGAAACTCTATCAACACAATCACAAAAGGGAATAGTAAACACATTATCTGGGCAGGTCTCTAATAAATCCAGATCCAGAATTTCCAAAACTCCTTCAGCAAAAACTGAAGGATGTTATAAGAAAAAAAGGGTGACGGTTGAAAGAGAAGCAGTCCGGCCTAAGAGAAAAATTATTAAATCCGCATCTTCTGTAAAATCTCCACAAGGAAGTGATGTTAGTCCACTGAACAAGGGAAGTAAACAGAGATTATCCACAATGTCTCCGGAGTCCTTGAGTCTCAAAAAATCTAGATCTGGTAGGTTACTTATACCTCCCTTGGAGTGTTGGCGCAATCAAATACCTATTTTTAATAGGGACCATGAAATTACTGGAATTCAGGAAGGCTCGTCTTTGATATCACCTTTTAGAGGCATTTCACCATCATTGGGCAGGTTTTGA 1491 0.4232 MADSSPTASTSNGTPTYSCFQRTVTLYDWWLVKSQKDFQGKCVAISGISSRKEEAVRIFNSAPIIKRYDEFSLETADGIYVLIRGFIHKQHTLDNGFTSEIFKSFLFGFPQNWESCALGCFREEAEVGAYSVNVVMDNVSAGFEEISADGEEKSIPTSLILPEEAPENCKTPFLGDGCKVSKGLSGIDVACGRGGNRRSSRLHNINAYQRKKHKKQHASRSPLKCPDEEPSYTSKAMENCNSDTAVLDNVSANLLEIPSDAVENSFPTSLVTSEKAMEDCNKLFLEDEHDMSIKTGEVNVVHGSGANRRSARLHNVKLYQKKQPAIGGPATHPDKDQTSASAALEKSDGRSETLSTQSQKGIVNTLSGQVSNKSRSRISKTPSAKTEGCYKKKRVTVEREAVRPKRKIIKSASSVKSPQGSDVSPLNKGSKQRLSTMSPESLSLKKSRSGRLLIPPLECWRNQIPIFNRDHEITGIQEGSSLISPFRGISPSLGRF* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0898 496 PANTHER MIS18-BINDING PROTEIN 1 5 487 - -
Tpr2g0898 496 MobiDBLite consensus disorder prediction 407 447 - -
Tpr2g0898 496 MobiDBLite consensus disorder prediction 412 445 - -
Tpr2g0898 496 PANTHER MIS18-BINDING PROTEIN 1 5 487 IPR039110 -
Tpr2g0898 496 MobiDBLite consensus disorder prediction 334 383 - -
Tpr2g0898 496 MobiDBLite consensus disorder prediction 323 390 - -
Tpr2g0898 496 MobiDBLite consensus disorder prediction 209 229 - -
Tpr2g0898 496 Pfam SANTA (SANT Associated) 24 115 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0898 Tpr-Chr2 10945813 10951582 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g0898 SANTA 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0898 - - gmx:100790080 469.544