Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0892 ATGTCGTTTTCTTTATTCTCCACTCCTCAACAACCGCAACAACAACAACAATCACAATTATTTCAACCACAACAACAACAATCTCCTTTTCAGCAGCAGAGTAATTTGTTCCAGCCACAACAACAACAGCAGCAACAATTTCAAGCTCAACAACAGCAGCAACAACAACAGCAGCAACAATTAGTTTTGTTCACTAATGATCGAACTCCGGCGAGTTACAGCACCAATTGGGCGGATCTACATCCCGATTCCCAGAAATATCTACTTCAGATTGAGGAACGGATATTGGAGTATAGAGATGAAAGTCAGAGACTTGATCAGTGTAATCGTCTTTATGATTCGTCTGTTTCAAACGATGGATTTGAGGTTGATGCAAGCCATATTGTTCAGGAACTTGGCGGAATCAGCACTGCTATGGAACGACAGAAAACTTTACTACAGGAACTGATGTCAGCTGTTAAGGATATGTTACGTAATACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTCTTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACCCCTGGAGCCACAGCACCTAGTTCGAGCATCCAACCAACATCTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAACAAACAGTTCTTAGATTTGAGAAATATCTTTGTGAATGTCATCAGTGGATTCAAGAGTTAGAGCAGCTGCTTCTCTTAGACTCTGAAAAAAACGGTTCCGGTAATGGATCCTCGTTATTGCAATCTCTTCCGAAAGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGTGGAGAGCATTCACCAGTACATGGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGCGGGGAGGTGAATGATCCATTTCTAGAGGCTGATCGTCGAGAAACTGCACGACAAGAAGCAGCATCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCCGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGACTTCCCAACAGACCGCTGCAACAACTTCATCTTTGTCAACAGGAAGTGGTTTATCTCTTTTTAGCACACCGACTTCTGCCCCATCATCATCAATGCCATCGTTGTTTGCAACACCAACAACTCCTGCTACAGGACCCTCATGGTTTGCATCATCCAGTTCTACGCCTCAACCACAATCCTCAATTTTTGGTTCTGCATCATCTTCCTTACCTGGTGCGACACCAACTCCCTCTCTGTTCGGTAATAATACTCCCCTGTTTAATTCAACTCCGGCTCCAAGCTCACTCTTTTCAACTCCGTTTGCTTCAGGTGCTGCAACAGGATCAGGAACAAGCTTTGGGGGATCTAAAAATCCACGGCCAAAATCCAGAACTGCTCGGCGCTAA 1473 0.4426 MSFSLFSTPQQPQQQQQSQLFQPQQQQSPFQQQSNLFQPQQQQQQQFQAQQQQQQQQQQQLVLFTNDRTPASYSTNWADLHPDSQKYLLQIEERILEYRDESQRLDQCNRLYDSSVSNDGFEVDASHIVQELGGISTAMERQKTLLQELMSAVKDMLRNTEVAVRSFMMLRPRFFHPSGGASSATAPSQTPGATAPSSSIQPTSTSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLCECHQWIQELEQLLLLDSEKNGSGNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTSQQTAATTSSLSTGSGLSLFSTPTSAPSSSMPSLFATPTTPATGPSWFASSSSTPQPQSSIFGSASSSLPGATPTPSLFGNNTPLFNSTPAPSSLFSTPFASGAATGSGTSFGGSKNPRPKSRTARR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0892 490 MobiDBLite consensus disorder prediction 313 346 - -
Tpr2g0892 490 MobiDBLite consensus disorder prediction 180 201 - -
Tpr2g0892 490 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 8 487 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Tpr2g0892 490 MobiDBLite consensus disorder prediction 460 490 - -
Tpr2g0892 490 MobiDBLite consensus disorder prediction 408 448 - -
Tpr2g0892 490 Gene3D - 220 310 - -
Tpr2g0892 490 Coils Coil 40 60 - -
Tpr2g0892 490 Coils Coil 139 159 - -
Tpr2g0892 490 MobiDBLite consensus disorder prediction 181 201 - -
Tpr2g0892 490 MobiDBLite consensus disorder prediction 460 481 - -
Tpr2g0892 490 MobiDBLite consensus disorder prediction 313 332 - -
Tpr2g0892 490 MobiDBLite consensus disorder prediction 1 49 - -
Tpr2g0892 490 PANTHER NUCLEOPORIN P58/P45 8 487 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0892 4 490 NAC Transcription Factor Family AT4G37130 62.178 1.66e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0892 K14307 - gmx:100776992 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0892 2 10904587 10910469 Tpr2g0892 2 10904587 10910469 ECH