Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0879 ATGAATCCTCCTCCTCCGCCGTCGTCCATGTCTACCGGAGCAACCATTGATATGCCGATCATGCACGATAGTGATCGTTATGATTTCGTTCGTGATATTGGATCAGGGAATTTTGGTGTTGCTAGACTCATGAGAGATAAACATACTAAAGAGCTTGTTGCTGTTAAGTATATTGAACGTGGTGATAAGATTGATGAAAATGTTAAGAGAGAAATAATCAACCACAGGTCTCTGAGACATCCTAATATTGTCAGGTTTAAGGAGGTAATTTTGACCCCTACTCATCTGGCTATTGTAATGGAATATGCATCTGGAGGAGAAATGTTTGAACGAATCAGCAAAGCAGGACGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTCAATGCAAATATGTCACCGGGACCTGAAGTTGGAAAATACTTTGTTAGATGGAGACCCAGCACTTCATTTGAAGATTTGTGATTTTGGATACTCCAAGTCTTCGGTGCTTCATTCGCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTACTGCTGAAGCAAGAGTATGATGGAAAGGTTGCAGATGTATGGTCATGTGGAGTAACCTTATACGTGATGCTAGTGGGATCATACCCCTTTGAAGATCCCGTTAATCCGAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCGTTCCAGACTTTGTTCAAATATCTCCTGACTGTCGCGACATTATATCAAGAATATTTGTTTTTGACCCTGCAGAGAGAATCACCATTCCAGAAATAATGAAAAATGAATGGTTTCGGAAGAATCTTCCTGCCGATTTGGTGAATGAAAAGGTATTGGATAACCAATTTGAAGAGCCAGATCAACCCATGCAGAGCATGGATACAATCATGCAGATAATTTCAGAGGCTACCGTACCAGCAGCTGGGATCTATTTAGACCAGTTTATATCTGATAACTTCGACGTGGATGATGACATGGATGATATAGATTCTGACTATGAACTTGATGTAGATAGCAGCGGGGAGATTGTATATGCCATATAA 1098 0.4107 MNPPPPPSSMSTGATIDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEMFERISKAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPVNPKDFRKTIQRVLSVQYSVPDFVQISPDCRDIISRIFVFDPAERITIPEIMKNEWFRKNLPADLVNEKVLDNQFEEPDQPMQSMDTIMQIISEATVPAAGIYLDQFISDNFDVDDDMDDIDSDYELDVDSSGEIVYAI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0879 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Tpr2g0879 365 SUPERFAMILY Protein kinase-like (PK-like) 10 321 IPR011009 -
Tpr2g0879 365 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 18 359 - -
Tpr2g0879 365 ProSiteProfiles Protein kinase domain profile. 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0879 365 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0879 365 PANTHER SERINE/THREONINE KINASE 18 359 - -
Tpr2g0879 365 Gene3D Phosphorylase Kinase; domain 1 8 102 - -
Tpr2g0879 365 SMART serkin_6 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0879 365 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Tpr2g0879 365 Gene3D Transferase(Phosphotransferase) domain 1 103 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0879 Tpr-Chr2 10783308 10787920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0879 26 287 CBL-interacting serine-threonine protein kinases AT5G25110 43.636 4.53e-69 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr2g0879 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0879 K14498 - gmx:100783967 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4073 4 47520796 47525364 Tpr2g0879 2 10783308 10787920 PCT