Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0871 ATGGGTATTTGCACTTCAAAATCAACACACTCCTCCTCTCGCAATTTCAACACTAACAACAACCTTCAACTTCCTCCAACCAACTCCGTTACAGTTAACGCCACTTCAGAACCTTACACAAACTCCGTTAATGGCGAAAACCAAAACCCTAATACTGAACAACAAAATGTTAAGAGATCTCCGTTTTTTCCGTTCTATAGTCCGAGTCCAGCTCATCAATTTTTCTCAAAGATGTCTCCGGCGAGGAAATTTTTTAAGAAACCGTTTCCTCCACCGTCTCCGGCGAAGCATATAAGATCGCTTCTAGCACGGAGACATGGTTCGGTTAAGCCTAATGAAGCTTCGATACCGGAAGGTGGTGAAGAGGAGACTGTGTCTGTTGCTGCTCTTGATAAGAATTTTGGATTCTCCAAGCATTTTGGAAGTAAATATGATGTTGGAGATGAAGTTGGAAGAGGACATTTTGGTTATACTTGTGCTGCTAGGTTGAAGAAAGGTGATCTTAAAGGTCAACAAGTTGCTGTCAAAGTGATTCCTAAAGCCAAGATGACTACTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATATTGAGAGCTTTGAATGGACATAAGAATCTAGTACGATTCTATGAGGCTTATGAAGATAATGCTAATGTCTATATAGTAATGGAATTGTGTGAAGGTGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGGAAATACACAGAGGAAGATGCAAAAGCTATCCTGAGACAAATACTGAATGCTGCTGCATTTTGCCATCTACAGGGTGTTGTACATCGTGATCTTAAACCGGAGAACTTCTTGTTTGCATCCATGGATGAAAACTCAGAACTGAAGGCCATAGACTTTGGGCTGTCAGATTTTGTTAAACTAGATGAAAGGCTCAATGATATTGTGGGTAGTGCATACTATGTGGCTCCTGAAGTTCTACATAGAGCTTATAGTACTGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGCCGTCCCTTTTGGGCTCGGACTGAGTCTGGCATCTTTCGTACTGTATTGAAAGCAGATCCAAGTTTTGACGAACCTCCTTGGCCTTCTCTATCAGACGAGGCAAGGGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAAAGAATGAGTGCAGCGCAGGCATTACGTCATCCGTGGATTAAAAACTACGAGGATGCGGAATTGCCTTTGGATATTTTAGTATTCAAGCTCATGAAGACATACATGCGTTCTTCATCTCTAAGAAGAGCTGCTTTAAGGGCTCTGTCTAAGACATTAACTGAGGATGAGCTCGTTTATTTGAAAGAGCAATTTGCACTTTTAGAGCCCAACAAAAATGGCACCATTAGCTTGGAAAATATACAAGCGGCCTTTACGTTAAATGCCACAGATGCTATGAAGGAGTCACGCATTGCTGACTTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGGTTTTGATGAGTTCTGTGCAGCTACACTTAGTGTTCATCAACTTGAAGCACTTGACCACTGGGAAAAGCGTGCTCGTTGTGCCTTTGACATGTTTGAAAAGGATGGAAACAAGGCCATAGTCATCGACGAATTAGCTTCGGAACTTGGGCTTGGTCCATCTATCCCTGTACATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGGAAGTTAAGCTTCCTTGGATTTGTAAAATTGTTGCATGGCCCATCAAGGAGTCTTGCAAAAGCTCAATAA 1794 0.4158 MGICTSKSTHSSSRNFNTNNNLQLPPTNSVTVNATSEPYTNSVNGENQNPNTEQQNVKRSPFFPFYSPSPAHQFFSKMSPARKFFKKPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGGEEETVSVAALDKNFGFSKHFGSKYDVGDEVGRGHFGYTCAARLKKGDLKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHKNLVRFYEAYEDNANVYIVMELCEGGELLDRILSRGGKYTEEDAKAILRQILNAAAFCHLQGVVHRDLKPENFLFASMDENSELKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEPPWPSLSDEARDFVKRLLNKDPRKRMSAAQALRHPWIKNYEDAELPLDILVFKLMKTYMRSSSLRRAALRALSKTLTEDELVYLKEQFALLEPNKNGTISLENIQAAFTLNATDAMKESRIADFLASLNALQYRRMGFDEFCAATLSVHQLEALDHWEKRARCAFDMFEKDGNKAIVIDELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0871 597 Gene3D - 431 585 - -
Tpr2g0871 597 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Tpr2g0871 597 MobiDBLite consensus disorder prediction 1 27 - -
Tpr2g0871 597 SUPERFAMILY Protein kinase-like (PK-like) 141 437 IPR011009 -
Tpr2g0871 597 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 592 - -
Tpr2g0871 597 Gene3D Transferase(Phosphotransferase) domain 1 233 418 - -
Tpr2g0871 597 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Tpr2g0871 597 ProSiteProfiles Protein kinase domain profile. 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0871 597 Pfam Protein kinase domain 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0871 597 CDD STKc_CAMK 143 405 - -
Tpr2g0871 597 Gene3D - 424 515 - -
Tpr2g0871 597 SUPERFAMILY EF-hand 434 588 IPR011992 -
Tpr2g0871 597 ProSitePatterns Protein kinases ATP-binding region signature. 150 176 IPR017441 GO:0005524
Tpr2g0871 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Tpr2g0871 597 SMART serkin_6 144 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0871 597 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 44 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0871 Tpr-Chr2 10695536 10700321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0871 1 597 EF-hand Containing Proteins AT3G50530 70.827 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr2g0871 Pkinase 3.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0871 K00924 - gmx:100794177 920.998