Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0843 ATGGATAATGAAGACATAATGAAAACTTTAGGAAATGTTGAAAGCAACATGGACATGATGACAATGATGATGCAAATGGATGACAAGTTTCATGATTCATATAATGAACCTTTTTATACCAACAATGAAAACAATTTCCCTTATGTAACTTCATCATTCACACCCTCTTTGATCAATCCTCCACCAATATCCTATCCATTAATGACACCGTCTCTTCAAACGACGACCAACAGAGTTCAAATCCCGTCAGAGACAGTTAACAACGCGTCGTTTTCCTACCCTCAGAAAAAGACATCAATGTCAGCAATGAGGGAGATGATATTCCGTATGGCGGTTATGCAACCGATTCATATCGATCCAGAAACAATAAAACCACCAAAGAGAAAGAATGTGAAGATTTCAAAGGATCCACAGAGTGTAGCAGCAAGACATAGAAGAGAAAGAATTAGTGAGAGAATAAGGATATTACAAAGATTAGTTCCTGGTGGAACTAAAATGGATACAGCTTCAATGTTAGATGAAGCTATACATTATGTGAAGTTTTTGAAGAAACAAGTTCAAACGTTGGAACAAGCTGGAGCAAATAAACCTTTGAATTTTGTTGGGTTTTCAGGAATGGTTTCTAATGGGAATATTAATTATTATTCTTCTAATTTGCTTAGAGGTTGTTCATCACCTTGTCAAATTATGGGTCCTACTTCCAAAAAAATGCTTAGTTGA 720 0.3569 MDNEDIMKTLGNVESNMDMMTMMMQMDDKFHDSYNEPFYTNNENNFPYVTSSFTPSLINPPPISYPLMTPSLQTTTNRVQIPSETVNNASFSYPQKKTSMSAMREMIFRMAVMQPIHIDPETIKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGANKPLNFVGFSGMVSNGNINYYSSNLLRGCSSPCQIMGPTSKKMLS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0843 239 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 6 232 IPR045843 GO:0003700|GO:0006355
Tpr2g0843 239 Coils Coil 172 192 - -
Tpr2g0843 239 CDD bHLH_AtIND_like 134 190 - -
Tpr2g0843 239 PANTHER TRANSCRIPTION FACTOR HEC2 6 232 - -
Tpr2g0843 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 191 IPR036638 GO:0046983
Tpr2g0843 239 Gene3D - 132 199 IPR036638 GO:0046983
Tpr2g0843 239 Pfam Helix-loop-helix DNA-binding domain 143 182 IPR011598 GO:0046983
Tpr2g0843 239 SMART finulus 139 188 IPR011598 GO:0046983
Tpr2g0843 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0843 Tpr-Chr2 10335805 10336930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0843 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.500 1.10e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr2g0843 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0843 - - gmx:100796649 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0843 2 10335805 10336930 Tpr2g0843 2 10335805 10336930 ECH