Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0838 ATGCACGATCATTCCACCGACACAATGAACGACCAACTTTCAAACCAAACATCAATCTTCGGTCTCCGTTTATGGGTTGTCTTAGGTGTCTCCGTCGGTGTCGTCATCGTCCTCCTCCTCTTCCTCATCTCCGTTTGGCTAGCATTCAAACGTAACAACAACAACAACAATAACAACCACAATTCAAAAACCATAAAACCTTCCATCCCAGATGACTCTAAAGAAATTCAAGAAATTAGACTTGACCTTGTTCCACCTCAACCCGACCCGTTTCTTGAACCCGACCCATTATCATCATCCGAACAACAACATCATCAACTACACCCAGAAGAAGAAAGTACTCCGTTAAGTTATAAAAGAATTCAGTTTGAGATAGGTAAAAATCATAGGATATCTTATCCTGAACAACGTGGTTCTGTTATAAGGTCTTCTAATTCTCGTGAACATAGTGGAGAATCTCGACCGTTGGATCAAGTTTCTACGGTCATTCCTCAAGTTTCTCATCTCGGTTGGGGTCATTGGTATACTCTTAGAGAATTGGAAGATGCTACTAATGCATTTGCTCCTGAAAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTATTTTGAAGGATAATACTAATATTGCAATTAAGAATTTGCTTAATAATAGAGGACAAGCTGAAAGAGAATTCAAGGTTGAAGTCGAAGCTATCGGAAGAGTTCGACATAAGAATTTAGTAAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTAGTGTATGAGTTTGTTGACAATGGAAACTTGGAGCAATGGTTACATGGTGATGTTGGGCCTATTAGTCCACTAACATGGGAAATTCGAATGAACATTATTCTCGGAACGGCTAAAGGTTTGACTTATCTTCATGAGGGGCTAGAACCAAAAGTTGTTCATCGCGATATTAAATCAAGCAACATTTTACTTAATAAGCAATGGAATTCAAAGGTTTCTGATTTTGGCCTTGCAAAACTTCTTAGCCCTGAGAGCAGCTATATTACAACCCGAGTCATGGGTACATTCGGATATGTAGCTCCTGAATATGCAAGTACTGGAATGTTGAACGAACGAAGTGATGTATATAGTTTTGGAATTCTTATTATGGAAGTGATTACAGGCAGAAATCCAGTTGAATATAGTCGACCTGCAGAAGAGGTGAATTTAGTTGAGTGGCTCAAGAAGATGGTTGGTAACAGAAATCCAGAGGGAGTGTTGGATCCAAAGCTTCCCGAGAAACCAACTTCGAGGGCACTAAAACGAGCTCTTCTTGTAGCCTTACGCTGCACCGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTAATACACATGCTTGAAGCTGAAGATTCACCTTACAAAGAGGAGCGCAGAATTAGAAGGGATGCAGGCGTAGCAAATTCACCTACCGCCAGAATAGAGGATAGATCAAAAGAGGAGGCGGAGGCCGCTGTATCTATTGATGATGGTATGCTTGAAAACGAGAAGAGTAGTGATGAGACAAGATCAAATCATGAAATAGAGAAGCAATAA 1569 0.4054 MHDHSTDTMNDQLSNQTSIFGLRLWVVLGVSVGVVIVLLLFLISVWLAFKRNNNNNNNNHNSKTIKPSIPDDSKEIQEIRLDLVPPQPDPFLEPDPLSSSEQQHHQLHPEEESTPLSYKRIQFEIGKNHRISYPEQRGSVIRSSNSREHSGESRPLDQVSTVIPQVSHLGWGHWYTLRELEDATNAFAPENVIGEGGYGIVYHGILKDNTNIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFVDNGNLEQWLHGDVGPISPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLNKQWNSKVSDFGLAKLLSPESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVEYSRPAEEVNLVEWLKKMVGNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEERRIRRDAGVANSPTARIEDRSKEEAEAAVSIDDGMLENEKSSDETRSNHEIEKQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0838 522 SMART serkin_6 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0838 522 SUPERFAMILY Protein kinase-like (PK-like) 162 459 IPR011009 -
Tpr2g0838 522 Coils Coil 207 227 - -
Tpr2g0838 522 MobiDBLite consensus disorder prediction 504 522 - -
Tpr2g0838 522 Gene3D Transferase(Phosphotransferase) domain 1 263 479 - -
Tpr2g0838 522 CDD STKc_IRAK 193 459 - -
Tpr2g0838 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Tpr2g0838 522 Pfam Protein kinase domain 190 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0838 522 MobiDBLite consensus disorder prediction 134 157 - -
Tpr2g0838 522 ProSiteProfiles Protein kinase domain profile. 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0838 522 Gene3D Phosphorylase Kinase; domain 1 156 262 - -
Tpr2g0838 522 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Tpr2g0838 522 PANTHER OS01G0323000 PROTEIN 1 508 - -
Tpr2g0838 522 PANTHER RECEPTOR-LIKE KINASE PLANT 1 508 - -
Tpr2g0838 522 MobiDBLite consensus disorder prediction 473 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0838 Tpr-Chr2 10288013 10291447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0838 15 454 Trihelix Transcription Factor Family AT1G68690 37.444 2.01e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tpr2g0838 Pkinase 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0838 - - gmx:100797440 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0838 2 10288013 10291447 Tpr2g0838 2 10288013 10291447 ECH