Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0831 ATGGGAGATAATATCTCTAATTCCTCATCACAAGATGAAATCTCTCTTTTTCTCCGTCAAATTCTCCTCCGTTCATCTTCTTCTTCTTCCATGCCCGGATCCAACCCACTTCAAGATGGGAACATCTCACTCTTTGATTCCACTTTCAGACCAAACCATCCTTTAAATGTCTCTTCATCTTCTGTTGCTGGTGGAGGAGGAGGAGGAGGAGGACTCAGTGGTAATGATACTGATGAATATGACTGTGAAAGTGAGGAGGGTGCTGAAGTATTGACCGAAGAAATTCCAAGAAAGTCTGGTGCTTCTAGGAGTTCTTCAAAAAGAAGTAGAGCAGCTGAAGTTCATAACTTGTCTGAAAAGAGAAGAAGGAGTAGGATCAATGAGAAAATGAAGGCTTTACAAAATCTAATTCCTAATTCTAACAAGACTGATAAGGCTTCAATGCTAGATGAAGCTATTGAATACCTTAAACAGCTTCAGCTCCAAGTACAGATGCTGTCATTGAGAAATGGATTGAGTTTGCATCCCATGTGCTTTCCCGAAGGCTTGCATTCTCTTCCATTTTCTAGGATGAGTACGGAGTTGAGTGAAGGAAACAGGTCTGCCCCTTTAAACATGGCATCTACTCTGCCTCATCCCCAAGACAATCCCTTGCTCTATGCATCCAATCTACCTAACAAAAACACATTGCTGAGTCAGCCATCAATGTCCTCCTATCCTTCATATATTAACAACGCAGAAACTTCTTTCGGTCTAGAATCCCGTATTCCAGCACAGAAAAAACGTCTTCAACGATCTTCAGAGGCAATAGATGGTGAAGACATGTTGCAGCACCAGCAATTGAATCCAATCTATTCTGCTACCAATCTAGGTGGTTCTCAAGTTGCCAAAGAATTCGAGTCAGGCACAGCGGCTACACCTACTACTAACAATTCTCTGCAAACGTGCATCACCGGAAGAGATCAGGCAGGAGCAATCATGAGAAATACCGAGGCCAACATTATATTTTCATCGCAGTTAAGTAGGTAA 1029 0.4218 MGDNISNSSSQDEISLFLRQILLRSSSSSSMPGSNPLQDGNISLFDSTFRPNHPLNVSSSSVAGGGGGGGGLSGNDTDEYDCESEEGAEVLTEEIPRKSGASRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNGLSLHPMCFPEGLHSLPFSRMSTELSEGNRSAPLNMASTLPHPQDNPLLYASNLPNKNTLLSQPSMSSYPSYINNAETSFGLESRIPAQKKRLQRSSEAIDGEDMLQHQQLNPIYSATNLGGSQVAKEFESGTAATPTTNNSLQTCITGRDQAGAIMRNTEANIIFSSQLSR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0831 342 MobiDBLite consensus disorder prediction 77 122 - -
Tpr2g0831 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 169 IPR036638 GO:0046983
Tpr2g0831 342 PANTHER TRANSCRIPTION FACTOR SPATULA 6 282 - -
Tpr2g0831 342 Gene3D - 105 168 IPR036638 GO:0046983
Tpr2g0831 342 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 6 282 IPR031066 -
Tpr2g0831 342 SMART finulus 116 165 IPR011598 GO:0046983
Tpr2g0831 342 MobiDBLite consensus disorder prediction 108 122 - -
Tpr2g0831 342 CDD bHLH_AtPIF_like 113 172 - -
Tpr2g0831 342 Pfam Helix-loop-helix DNA-binding domain 114 160 IPR011598 GO:0046983
Tpr2g0831 342 Coils Coil 149 169 - -
Tpr2g0831 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 159 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0831 Tpr-Chr2 10219139 10223398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0831 9 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 41.349 3.50e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr2g0831 HLH 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0831 - - gmx:100793754 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0831 2 10219139 10223398 Tpr2g0831 2 10219139 10223398 ECH