Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0824 ATGTGGGATCTGAATGACTCACCCGATCAGAGAAAAAATTATGAATCAGAAGCAGAAGGTTGTTCAATCGACGGTGATGAAGTTGATGAAAAAGGTAAAAGAGTTGGATCTATTTCAAATATTTCAAATTCAAGTTCATCTGCAGTAGTTATAGAAGATGGATCCGAAGAAGAAGATGACGGTAACGGCAACGGTAACGGTAACCGATTGTTGAAGAAAAAAGGTAGTAAGATATTTGGATTCTCAGTAGATGATGATGATGATGATAGTGAGTGTCCACCTGTGACTAGACAGTTTTTTCCGGTGGAAGATACTGAGATGACAGCGGTGGTGGATTCTACTTCCGGTGGTGGCAGTAGTGGTGGTGGAGGTTCTTCTTCTTTTCCACGTGCTCACTGGGTAGGTGTAAGATTTTGTCAATCGGAAACAGTTAACGGCGGTAAATTAATTGAAAATTCTGCTTCTCAACCGTCGAAGAAGAGTCGTCGAGGACCAAGGTCCAGAAGTTCTCAGTATAGAGGTGTTACTTTTTACAGAAGAACTGGTCGATGGGAATCTCATATTTGGGATTGTGGAAAACAAGTGTATTTGGGTGGATTTGACACAGCACATGCAGCTGCACGTGCATATGATAGAGCGGCAATTAAGTTCAGAGGAGTAGAAGCAGATATAAACTTCAACATAGAAGATTATGAAGAGGATTTGAAGCAGATGAGCAATTTAACTAAGGAAGAGTTTGTGCACGTACTTCGGCGACAAAGCACTGGATTTCCAAGAGGAAGTTCTAAATATAGAGGTGTAACTTTGCACAAATGTGGAAGATGGGAGGCGCGGATGGGTCAATTCTTAGGGAAAAATTTGATTCGATTTACCAGGTACGTTTATCTGGGTCTATTTGACACCGAGATTGAAGCTGCAAGGGCATATGATAAAGCAGCAATTAAATGCAATGGCAAAGAGGCGGTGACCAATTTTGATCCTAGCATCTATGATAATGAGCTTAATTCTGAATCCTCAGGTACCGCTACCGCGAATCACAATCTGGATTTGAGTTTGGGCAGTTCGAGTTCTAAAGGTAGCAATAATCAAGCATTTGGAAATCACAACACAAATGCCGCCACTGATCAGTATATGGCGCCTGAATCAAATTGGCGGAATGGTGGAATCAGGCCTAAGCCGGTGAATATACTACCAAAACCATGTGGTATGAGTAACATGGAAGCTTATGTAAGGGATGGATATGGAGAGAATGAAGCCTTGAGAATGCTAAGCCAAACTCATCTTCAATCTCCAGTCACTAATGAAATGCATAGATATGGTCCCTACAGATCACCTGTTGAACACCACCACCCTCAAATGCTTCGCAGTTTTCAACATCTTCACCCCTCAAATTTTCATGTTTCGAGTAGCAGCAGCAATGGAGGCCGAATTGGAAGTGATTTAACATTATCAATGTCCGATCAACAAAAGTGGCAAACGGGGCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCTCAGATAAGACCATCTACTTCTTCTCAAGGTTGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCTCTTGA 1605 0.4231 MWDLNDSPDQRKNYESEAEGCSIDGDEVDEKGKRVGSISNISNSSSSAVVIEDGSEEEDDGNGNGNGNRLLKKKGSKIFGFSVDDDDDDSECPPVTRQFFPVEDTEMTAVVDSTSGGGSSGGGGSSSFPRAHWVGVRFCQSETVNGGKLIENSASQPSKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKNLIRFTRYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGTATANHNLDLSLGSSSSKGSNNQAFGNHNTNAATDQYMAPESNWRNGGIRPKPVNILPKPCGMSNMEAYVRDGYGENEALRMLSQTHLQSPVTNEMHRYGPYRSPVEHHHPQMLRSFQHLHPSNFHVSSSSSNGGRIGSDLTLSMSDQQKWQTGPPHLLATAAASSGFPPQIRPSTSSQGWLQKNGFHTLMRPS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0824 534 MobiDBLite consensus disorder prediction 508 525 - -
Tpr2g0824 534 MobiDBLite consensus disorder prediction 147 172 - -
Tpr2g0824 534 MobiDBLite consensus disorder prediction 1 69 - -
Tpr2g0824 534 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 532 - -
Tpr2g0824 534 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 532 - -
Tpr2g0824 534 MobiDBLite consensus disorder prediction 507 534 - -
Tpr2g0824 534 Pfam AP2 domain 171 219 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 Pfam AP2 domain 262 317 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 PRINTS Ethylene responsive element binding protein signature 264 275 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 PRINTS Ethylene responsive element binding protein signature 308 328 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 CDD AP2 171 228 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 MobiDBLite consensus disorder prediction 36 51 - -
Tpr2g0824 534 SUPERFAMILY DNA-binding domain 170 228 IPR016177 GO:0003677
Tpr2g0824 534 ProSiteProfiles AP2/ERF domain profile. 263 326 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 CDD AP2 262 328 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 Gene3D AP2/ERF domain 170 229 IPR036955 GO:0003700|GO:0006355
Tpr2g0824 534 Gene3D AP2/ERF domain 262 327 IPR036955 GO:0003700|GO:0006355
Tpr2g0824 534 ProSiteProfiles AP2/ERF domain profile. 171 227 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 SMART rav1_2 171 233 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 SMART rav1_2 263 332 IPR001471 GO:0003700|GO:0006355
Tpr2g0824 534 SUPERFAMILY DNA-binding domain 262 328 IPR016177 GO:0003677
Tpr2g0824 534 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0824 Tpr-Chr2 10147417 10151021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0824 1 363 AP2-EREBP Transcription Factor Family AT4G36920 64.611 2.03e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Tpr2g0824 AP2 4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0824 K09284 - gmx:100786333 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0824 2 10147417 10151021 Tpr2g0824 2 10147417 10151021 ECH
Tpr2g0824 2 10147417 10151021 Tpr4g4016 4 46757005 46761219 PCT