Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0822 ATGGAAGGTGGAGGAAAAGGCGGTGGAGAGAGAAAGAGAAACGGTGGTGTCGTTGTTGACGGTGGAGCAGAGAGAAGATACAAAGGAATTCGTATGAGAAAGTGGGGTAAATGGGTAGCTGAAATACGAGAACCAAATAAACGTTCTCGTATTTGGTTAGGTTCATATTCTACACCTATCGCCGCCGCTAGAGCTTATGACACCGCCGTTTTCTATCTCCGTGGTCCTTCTGCTCGTCTTAATTTCCCTGAATTACTCGCCGGTGAAAACAACAACAACAACTCTGTTGTTTCTTGTGATTTATCTGCTGCTTCGATTCGTAAAAAAGCTACTGAAGTTGGTGCTAGGGTTGATGCTCTTCAAGCCACTCTTCACCATCATCATCACCATAATCATCATAATCATAACCACCGTGTTACTCCGCCGCCGCCGGAGTTACTTAACGGTGGTGGTGGTGGTGGTTCTGGTGATTTTGCGGAGCGGGTTGATTTGAATAAGATTCCTGAACCGGAGAGTTCAGATTGTGAATGGGAAGTTAATTGA 543 0.4549 MEGGGKGGGERKRNGGVVVDGGAERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPELLAGENNNNNSVVSCDLSAASIRKKATEVGARVDALQATLHHHHHHNHHNHNHRVTPPPPELLNGGGGGGSGDFAERVDLNKIPEPESSDCEWEVN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0822 180 MobiDBLite consensus disorder prediction 126 180 - -
Tpr2g0822 180 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Tpr2g0822 180 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Tpr2g0822 180 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Tpr2g0822 180 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Tpr2g0822 180 CDD AP2 26 85 IPR001471 GO:0003700|GO:0006355
Tpr2g0822 180 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Tpr2g0822 180 PRINTS Ethylene responsive element binding protein signature 65 85 IPR001471 GO:0003700|GO:0006355
Tpr2g0822 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 9 174 - -
Tpr2g0822 180 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Tpr2g0822 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 9 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0822 Tpr-Chr2 10094826 10095959 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0822 1 178 AP2-EREBP Transcription Factor Family AT5G67190 54.592 1.75e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr2g0822 AP2 4.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0822 K09286 - gmx:100527066 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0822 2 10094826 10095959 Tpr2g0822 2 10094826 10095959 ECH