Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0817 ATGTCCTTGTTAACAGTGGCGCATCAAAGAGGTTCAGGTGAGTTCACCGGATTCACGGTGAAGCGCGACGGCGATAATGATGGTGGAAGTTCTAGTACATCTCAATCATTAAATTTCAACCAAATGCAGAGTAATTCTTCAATGGTTTATAATGGTGATAGAGAATTAACACAAATGGTTTCAGCTCTAACACATGCTGCATCATCAGAGTCTAATCAAATGAGTAGTAATGAATGGATTCAAAGAAGTGGTTTTCCTAATGCATCATCATCTTCATCTTCTTATTCTTCTGGTTCTGGTTCTGGTTTTGTTATGACTTCTGGATCATGGAGTGGTAATAAAAGAGGGCGTGATGAAGAAAGTAGTGATTCTAATAATCACTTTTTACAACAAGCTGTTCCTAAACTCTTTAGAACTGTCATGGTACCTTCTCAAGGACAAGGACAAGGAGAATCTTCATCATCAGTGACTGAAGAAGCTCCAACCACAAGAACAACCATAGCCACCGCCACATCAACGGCAGCGTCACTCGAAGATTCCAGCCAACAGAGGAGAAGATACAGAGGAGTAAGGCAGAGACCATGGGGAAAATGGGCAGCAGAAATAAGAGATCCACACAAAGCACAAAGAGTTTGGCTTGGAACATTTGATACAGCAGAATCTGCAGCAAGAGCTTATGATGAAGCCGCATTGAGATTCAGAGGAAGCAGAGCAAAACTCAACTTTCCAGAAAATGTTAGATCCATTATGCCTCCGCCACCGCAACCACAACAACAACCACGACCACAACCACAGTCATTATCACAACTTCAATCTTTTTCAGCAGCCGCGGTTCCTTCTAGGACACCACAGCCGCCGGTTCAAGATTCCTCTGACTTGATTAGAGATTATTTAGAATATTCTCAAATTCTTCAAAGTTCTGGTGATTTTCAACTACAACAAATGCAGCAGCAACAACAGATGCAACAACAAGAACATGCTTCTAATTTGGTTCAACAATGGTATTATAATTCACAATTAGCTGCACTTCAATCACATTCAATGTTATCAACATCATCATCACTCTCTTTACCTTCTAATATATCACCTCCAATGGCTACAAGTTTACCTTCCACTCAATTTTCAACCTCTTCTAGTTCATTTCCCCTGTTTTCTAGTCAACAAATGGGATTTTTTCGACCCCCGGAAAACCGTCCACCTGGTGGTGGACGTGGTGGCAGAACAGAGTTTCCGCCATCAACGTGGTCAGATACTAGTGGGCATCCACCACCACCTTATGGTTGA 1284 0.4182 MSLLTVAHQRGSGEFTGFTVKRDGDNDGGSSSTSQSLNFNQMQSNSSMVYNGDRELTQMVSALTHAASSESNQMSSNEWIQRSGFPNASSSSSSYSSGSGSGFVMTSGSWSGNKRGRDEESSDSNNHFLQQAVPKLFRTVMVPSQGQGQGESSSSVTEEAPTTRTTIATATSTAASLEDSSQQRRRYRGVRQRPWGKWAAEIRDPHKAQRVWLGTFDTAESAARAYDEAALRFRGSRAKLNFPENVRSIMPPPPQPQQQPRPQPQSLSQLQSFSAAAVPSRTPQPPVQDSSDLIRDYLEYSQILQSSGDFQLQQMQQQQQMQQQEHASNLVQQWYYNSQLAALQSHSMLSTSSSLSLPSNISPPMATSLPSTQFSTSSSSFPLFSSQQMGFFRPPENRPPGGGRGGRTEFPPSTWSDTSGHPPPPYG* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0817 427 MobiDBLite consensus disorder prediction 369 392 - -
Tpr2g0817 427 ProSiteProfiles AP2/ERF domain profile. 186 243 IPR001471 GO:0003700|GO:0006355
Tpr2g0817 427 SMART rav1_2 186 249 IPR001471 GO:0003700|GO:0006355
Tpr2g0817 427 CDD AP2 194 245 IPR001471 GO:0003700|GO:0006355
Tpr2g0817 427 MobiDBLite consensus disorder prediction 369 427 - -
Tpr2g0817 427 PRINTS Ethylene responsive element binding protein signature 187 198 IPR001471 GO:0003700|GO:0006355
Tpr2g0817 427 PRINTS Ethylene responsive element binding protein signature 209 225 IPR001471 GO:0003700|GO:0006355
Tpr2g0817 427 Pfam AP2 domain 186 235 IPR001471 GO:0003700|GO:0006355
Tpr2g0817 427 Gene3D AP2/ERF domain 185 245 IPR036955 GO:0003700|GO:0006355
Tpr2g0817 427 SUPERFAMILY DNA-binding domain 186 244 IPR016177 GO:0003677
Tpr2g0817 427 MobiDBLite consensus disorder prediction 14 53 - -
Tpr2g0817 427 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 51 393 - -
Tpr2g0817 427 PANTHER DNA-BINDING DOMAIN 51 393 IPR044808 GO:0003700|GO:0009873
Tpr2g0817 427 MobiDBLite consensus disorder prediction 143 180 - -
Tpr2g0817 427 MobiDBLite consensus disorder prediction 253 289 - -
Tpr2g0817 427 MobiDBLite consensus disorder prediction 25 53 - -
Tpr2g0817 427 MobiDBLite consensus disorder prediction 143 190 - -
Tpr2g0817 427 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0817 Tpr-Chr2 9991827 9994552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0817 139 246 AP2-EREBP Transcription Factor Family AT5G61890 56.881 1.40e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr2g0817 AP2 4.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0817 - - mtr:MTR_6g037610 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0817 2 9991827 9994552 Tpr1g0865 1 7364169 7367092 PCT