Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0812 ATGGCTTCCTCTTCCTCTTCCTTCTCCATCAATGGACCTCAGCCTCAAACAATGGCTCCATCAACAAGACAAGTTGAGGTTAAGAACAAAGGAAAATTTGTTACTGCTTATATCATTGATCAGCCATATGGTGAAATGAGTCCGAAAATTATTGAAAAGATTTATCATGAACTTGAAGAAGAAGTTGTTGTGTTTGATAGCGAAAACCGTTCATTGAAAGTTAAGTTCAATCGATCAATTCAACATCCTCTTATTGTTGGTGGGTGGTCAGAAATGAGAGCTCATTTTGGAATTGATAGAAACAGAATGTTAGTCATGACTTATGTGGGTAAAAACCGTTTTATACTTGATTTTCTAAATCAAGAGTTTAATCCAAACAAGTTGCCTACTTACCATAGTTATTATCACTTTGCTGCTGATCCTGTGACATTTAATGTCACACTCACTCCTTATCTTGCTTCTGGCTCTCAGTTGTCCTTAAACAAAGACTTTGCTACCTACATAAGGAATTCTGGATTCGATAGTGTGGTTCTCTATGGTCCTCAAGGTGATGAGGTACCTTGCAAACTTGTGCTGAAGAATTCTAGAAATAAAGAGTACACAAAAATTGGTACAGGTTGGAAGAATTTCATTAATATAAATGGATTTGTTGCTGGAGATGTGCTCAACCTTAAGTTTGTCAACAAAGCAAATAGCAATCTGATGAAAGTTGTCAAAATCTAA 723 0.361 MASSSSSFSINGPQPQTMAPSTRQVEVKNKGKFVTAYIIDQPYGEMSPKIIEKIYHELEEEVVVFDSENRSLKVKFNRSIQHPLIVGGWSEMRAHFGIDRNRMLVMTYVGKNRFILDFLNQEFNPNKLPTYHSYYHFAADPVTFNVTLTPYLASGSQLSLNKDFATYIRNSGFDSVVLYGPQGDEVPCKLVLKNSRNKEYTKIGTGWKNFININGFVAGDVLNLKFVNKANSNLMKVVKI* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0812 240 MobiDBLite consensus disorder prediction 1 24 - -
Tpr2g0812 240 Gene3D - 25 122 IPR015300 -
Tpr2g0812 240 Pfam B3 DNA binding domain 145 232 IPR003340 GO:0003677
Tpr2g0812 240 SUPERFAMILY DNA-binding pseudobarrel domain 142 230 IPR015300 -
Tpr2g0812 240 SMART B3_2 143 240 IPR003340 GO:0003677
Tpr2g0812 240 Gene3D - 130 240 IPR015300 -
Tpr2g0812 240 ProSiteProfiles B3 DNA-binding domain profile. 143 240 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0812 Tpr-Chr2 9922250 9923398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0812 60 227 REM Transcription Factor Family AT1G26680 25.140 4.48e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr2g0812 B3 2.6e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0812 - K03427 vun:114169435 98.9821