Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0790 ATGACCATATTTTATGTTGGTAAAGAGGTAGCAGTAGCACACAAAATGAAGAGTAGTTTTCTTAGGTGTATGGCAATCTTGGAAAAAAATAAACCTTATGTTGCAATGCTCTTTATTCAATTTGTATATGCAGGAATGGCTCTTCTTTCAAAGGCAGCAATTTCCAAAGGAATGAGTCCTTTTGTGTTTGTTGTTTATCGCCAAATCTTTGCATCACTTGCCTTGTCTCCATTTGCTTATTTTGACAGCAAGCATGGTGCTCCTTTGTCATGCAACTTGTTGTGCAAATTGTTTCTAGTTTCCCTTGTTGGGTTAACAGCAAGTTCAAACCTTTACTATGTTGCTATCAACTATACCTCTGCAACATTTGCTGCTGCAAGCACAAACACAATCCCTTCCATTACATTTATCATGGCTGTTTTTATTGGGGTTGAAAGCATTTCAATAAAATATAGGCATGGAGTGGCAAAGATTTTGGGCTCTTTTTTATGCATTTCAGGGGCAATAGTATTTGCTTTAGTCAAAGGACCTCCATTAAGGTGGCATCATGAAAATCATTCTCATGAATTCACAAAGGTTCATTCCAAAGAGGATAACATAAAAGGCTCCCTTATGATGCTCTTAGCAAATACTGGTTGGTCTTTTTGGCTTATTTTGCAGGGATTTATTGTAAAGCAATATCCAGCAAAATTTCGGCTCACAATTATACAATGCTTTTTTAGCTTCATACAATCAAGTATTTTGGCCTTTGCAATGGAGAGGAATCCCTCTGCATGGAAGCTAGGATGGGATTTTCATCTTCTTTCTGTGGCTTATTGTGGTATAATTGTAACAGGCATTTGTTATTGGCTACAAGTATGCACAATAGAGATAAAAGGTCCAGTTTTCACTGCCATGTTCACCCCTCTAGCTCTTGTACTCACAGCCATTTTCTCGGCAATTTGGTGGAAAGAAACACTCTTCTGGGGAAGTATTGGTGGCACTATTTTGCTAGTGATTGGACTCTATAGTGTTTTGTGGGGGAAGAATAAAGAGGGTGTAAAAGAAGAAAACCATGAAGATGGAGAAGCAAAAGCTGAGACCAAATTGGAGTGCGTTATACAGTCCTGA 1110 0.382 MTIFYVGKEVAVAHKMKSSFLRCMAILEKNKPYVAMLFIQFVYAGMALLSKAAISKGMSPFVFVVYRQIFASLALSPFAYFDSKHGAPLSCNLLCKLFLVSLVGLTASSNLYYVAINYTSATFAAASTNTIPSITFIMAVFIGVESISIKYRHGVAKILGSFLCISGAIVFALVKGPPLRWHHENHSHEFTKVHSKEDNIKGSLMMLLANTGWSFWLILQGFIVKQYPAKFRLTIIQCFFSFIQSSILAFAMERNPSAWKLGWDFHLLSVAYCGIIVTGICYWLQVCTIEIKGPVFTAMFTPLALVLTAIFSAIWWKETLFWGSIGGTILLVIGLYSVLWGKNKEGVKEENHEDGEAKAETKLECVIQS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0790 369 PANTHER WAT1-RELATED PROTEIN 29 349 IPR030184 GO:0016021|GO:0022857
Tpr2g0790 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 172 - -
Tpr2g0790 369 PANTHER WAT1-RELATED PROTEIN 29 349 - -
Tpr2g0790 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 344 - -
Tpr2g0790 369 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020|GO:0016021
Tpr2g0790 369 Pfam EamA-like transporter family 32 167 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0790 Tpr-Chr2 9611082 9616746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0790 31 345 Nodulin-like Gene Family AT2G39510 40.312 2.38e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0790 - - gmx:100800562 535.028