Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0789 ATGCTAGGGGACTCAGCAGTGTTAGGAACAGGAGGAGGTAGCTCAGGAGATGGAGGAGCTTACCATGACGGCGGAGAGACGGTGGCAGGTGGTGGTGGATCAATATCAGGAGATGATGAAAGAGGGGGTGGTAGTAGAAATGAAGAAGGTGTTGATAGAAGTTTTGGTGGTAATAGATGGCCAAGACAAGAAACTCTTGCTTTGTTGAAGATAAGGTCAGATATGGATGTTGCTTTTAGAGATGCAAGTGTCAAAGGTCCCTTATGGGATGAAGTTTCAAGGAAAATGGCAGATCTTGGTTATCAAAGAAACTCCAAAAAATGCAAAGAGAAATTTGAAAATGTTTACAAATATCACAAGAGAACCAAAGAAGGAAGAGGTGGTAAATCAGATGGTAAAACTTATAGATTTTTTGATCAATTACAAGCTCTTGAAAATAACCCTTCAATTCAATCACCAAAACCACAACAATTAAACACAACACCATCACAATCATCTACACCTACAACAACAGCTCCATTACTATTACCACCCCCATTGTTAAACTCTACATCTTCTATTGCTCTTCCCACCCCTCCCACCACCACTGTTCCATCAACAACTACACTTTCAATTCCTATGTCTTATACACAATCCAACCCGACAAATTTTCCGCCAATGCCGATACCACCTCCGACAAATACAACTAACCCTCTTCCTCAAATTACTATAACACCCCCACCATCTTCATTCCCCAATATTTCAGCAGATTTCTTCTCTAATTCAAGCTCATCTTCGACTTCTTCGGAGGAAACAACGACAATGGAAGGTGGATCGAACCGGCGGAAGAGGAAGAGAAAGTGGAAGGATTTCTATGAGAGAATAATGAAGGAAGTTCTTCAGAAACAAGAGGAGTTGCATAAGAGATTCTTGGAAGCTATTGAGAAAAGAGAAAGAGAAAGATGTGCTAGAGAAGAAGCTTGGAGGGCACAAGAAATGCAAAGGATTAATAGAGAAAGAGAAATTCTTGCTCATGAGAGATCTATTGCTGCTTCTAAAGATGCTGCTGTTATGGCATTTTTGCAAAAGATTGCTGAACAACAAGAACAACAAAATATTGTTCCTCCTCCGTTGAACAACAACACCGTTGTTCCTCAACAAGTGCCTCAAGAAACAACACCGGCACCAACACCGATAGCAAAGCCTTTGCCAACACCGACACCATTGCCAATGGCGACACCACAAGTTCAAACTCCAGCACCATTGCCAATTCCAATACCAGCACCAGTTATACCTCAGGTTTCACCGTTGCCGCAACAACAGGCACAAGTTCAGCAGCAGCAAGTGACGAATATGGAAATTGTGAAGAGTGACAACAACGGTGGTGAGAGTGTGATGCAAGCAAGTTCTTCAAGGTGGCCGAAAACCGAGGTTGAAGCATTGATAAAGCTGAGAACAACTCTTGATATGAAGTACCAAGAAAATGGACCTAAAGGGCCACTATGGGAAGAGATTTCAAGCTTGATGAAGAACTTGGGGTACAATAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAGAATATCAACAAGTATTTCAAGAAAGTGAAAGAAAGCAACAAGAAAAGGCCAGAAGATTCAAAGACATGTCCTTATTTTCACCAGCTGGATGCTCTATATAGGGAGAAGAACAAAGGAGAGGGTGCTGCGGTAGTGAGGCCTGAGGGAACGATGATGGCGCCATTGATGGTTCAGCCGGAGCAGCAGTGGCCTCCACAGCAGCCACCACCAACAACCGGAGCAGATGTAACCATGGAGGATGCTGAGAAAGATAGGCCGCACCGTGATGAAGAAGCGTTTTATGATGACGACGACGGTGACGATGAAGAAGAGGAAGATGAAGGAAGTGACAACTATGAAGTGGTTGCCAACAAACCACCCCCACCACAATAA 1929 0.4334 MLGDSAVLGTGGGSSGDGGAYHDGGETVAGGGGSISGDDERGGGSRNEEGVDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKMADLGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSIQSPKPQQLNTTPSQSSTPTTTAPLLLPPPLLNSTSSIALPTPPTTTVPSTTTLSIPMSYTQSNPTNFPPMPIPPPTNTTNPLPQITITPPPSSFPNISADFFSNSSSSSTSSEETTTMEGGSNRRKRKRKWKDFYERIMKEVLQKQEELHKRFLEAIEKRERERCAREEAWRAQEMQRINREREILAHERSIAASKDAAVMAFLQKIAEQQEQQNIVPPPLNNNTVVPQQVPQETTPAPTPIAKPLPTPTPLPMATPQVQTPAPLPIPIPAPVIPQVSPLPQQQAQVQQQQVTNMEIVKSDNNGGESVMQASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISSLMKNLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKGEGAAVVRPEGTMMAPLMVQPEQQWPPQQPPPTTGADVTMEDAEKDRPHRDEEAFYDDDDGDDEEEEDEGSDNYEVVANKPPPPQ* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0789 642 MobiDBLite consensus disorder prediction 41 55 - -
Tpr2g0789 642 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 16 635 - -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 147 170 - -
Tpr2g0789 642 ProSiteProfiles Myb-like domain profile. 464 522 IPR001005 -
Tpr2g0789 642 Gene3D - 60 121 - -
Tpr2g0789 642 Gene3D - 466 527 - -
Tpr2g0789 642 PANTHER - 16 635 - -
Tpr2g0789 642 Pfam Myb/SANT-like DNA-binding domain 58 144 IPR044822 -
Tpr2g0789 642 Pfam Myb/SANT-like DNA-binding domain 464 551 IPR044822 -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 253 278 - -
Tpr2g0789 642 SMART sant 56 118 IPR001005 -
Tpr2g0789 642 SMART sant 462 524 IPR001005 -
Tpr2g0789 642 CDD GT1 464 529 - -
Tpr2g0789 642 CDD GT1 58 123 - -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 253 268 - -
Tpr2g0789 642 ProSiteProfiles Myb-like domain profile. 58 116 IPR001005 -
Tpr2g0789 642 Coils Coil 293 313 - -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 577 642 - -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 1 59 - -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 596 611 - -
Tpr2g0789 642 MobiDBLite consensus disorder prediction 612 629 - -
Tpr2g0789 642 SUPERFAMILY Homeodomain-like 464 524 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0789 Tpr-Chr2 9563951 9567702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0789 442 582 Trihelix Transcription Factor Family AT1G76880 66.883 1.17e-61 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr2g0789 Myb_DNA-bind_4 2.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0789 - - gmx:547624 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0789 2 9563951 9567702 Tpr1g0849 1 7186045 7189641 PCT