Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0788 ATGGAAGGAAATTTAGCTCAAGGAGGTATAATTCAAGGTGTTGGTGGTGGTGGTTCTTTTGGTGGTTTTGATTTGCCGGGATCGATGCGAGTTAATCGTCCAGCGCAACATACAATGAATCAACATCAAGCTCATCCATGTCAAGGGTCGTCGGTGCATTCGTCAATTCATGATGGTTTTCCTCTAACAATGGGGACGTTGCAGAACTGTGATCAGACAATGTCGATTAATGAGTTTGGTCAGGGAGATAGAAACAAACATTCGGGGAGTGAGGAAGACGAGCCTGAGGAAGGTGGTGATGGTCATCATCAAGAAGGCTGTAGAGGGAAAAAGGGGACGCCTTGGCAGCGTGTAAAATGGACTGATAAGATGGTGAGGCTTTTGATAACGGCGGTGTCTTATATTGGCGAGGACGGGAGTTCTGAAGGTGGAGGTGGAGGAAGGAAGAAATTTGCGGTGTTGCAGAAAAAGGGTAAGTGGAAATCTATTTCTAAGGTTATGGCTGAAAGAGGTTATCGTGTTTCGCCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGATACAAAAAGCTTAACGATATGCTTGGAAGGGGAACTTCTTGTCAGGTTGTTGAAAATCCGGCTTTGTTGGATGTAATAGATTTTCTTAACGAGAAAGAAAAGGACGATGTTAGAAAAATATTAAACTCGAAACATCTTTTCTATGAAGAGATGTGTTCTTACCATAATTGTAATAGATTGCATTTGCCGCACGATCCTGCATTGCAACGTTCCCTGCAGATAGCTCTCCGAAATAGAGATGATCATGATAACGATGATGTGAGAAGGTCCTATCATGATGATCATGACGAAGATGATCATGATATGGAAACTGACGATCATGATGAGTTCGAAGAGAATTTTGCTTCCCATGGTGATAGTCGAGGAATATTTGGAGGATTGGGAGGAACTTCAAAAAGACTAAGACAAGGCCAAGGACACGAAGATGCTACTACTTTCGGGAATTCTATAAATTGTCAGGAGTACCATAAAAGTTCGCATCCTCATGGACAAACAGTCCAAACAGACGGAAATCAAGCTTTACCTGAAAACATGAGAGCAGCTTGGTTACAGAAGCAATGGTTGGATTCTCGCTCAGTTCAGTTAGAAGAACAGAAGCTACAAATTCAGGTTGAGATGCTGGAATTAGAGAAACAAAGATTGAAGTGGGAGAGGTTTAGCAAGAAACAAGACCGGGAGTTGGAGAAGTTCAAGCTGGAGAACGATAGAATGAAGATTGAGAATGAACGTATTGCTTTAGAACTAAAGCGAAAGGAGATCGGCGGCACTAGCTTTAACTAG 1347 0.4202 MEGNLAQGGIIQGVGGGGSFGGFDLPGSMRVNRPAQHTMNQHQAHPCQGSSVHSSIHDGFPLTMGTLQNCDQTMSINEFGQGDRNKHSGSEEDEPEEGGDGHHQEGCRGKKGTPWQRVKWTDKMVRLLITAVSYIGEDGSSEGGGGGRKKFAVLQKKGKWKSISKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDFLNEKEKDDVRKILNSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDNDDVRRSYHDDHDEDDHDMETDDHDEFEENFASHGDSRGIFGGLGGTSKRLRQGQGHEDATTFGNSINCQEYHKSSHPHGQTVQTDGNQALPENMRAAWLQKQWLDSRSVQLEEQKLQIQVEMLELEKQRLKWERFSKKQDRELEKFKLENDRMKIENERIALELKRKEIGGTSFN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0788 448 Coils Coil 381 406 - -
Tpr2g0788 448 MobiDBLite consensus disorder prediction 271 297 - -
Tpr2g0788 448 PANTHER FACTOR, PUTATIVE-RELATED 1 443 - -
Tpr2g0788 448 MobiDBLite consensus disorder prediction 271 286 - -
Tpr2g0788 448 Coils Coil 409 438 - -
Tpr2g0788 448 Pfam Myb/SANT-like DNA-binding domain 117 243 IPR044822 -
Tpr2g0788 448 MobiDBLite consensus disorder prediction 77 114 - -
Tpr2g0788 448 Gene3D - 120 192 - -
Tpr2g0788 448 MobiDBLite consensus disorder prediction 84 114 - -
Tpr2g0788 448 PANTHER F16F4.11 PROTEIN-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0788 Tpr-Chr2 9532579 9534888 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr2g0788 Myb_DNA-bind_4 1.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0788 - - mtr:MTR_6g035315 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0788 2 9532579 9534888 Tpr1g0848 1 7160265 7163335 PCT