Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0782 ATGGCATCACTCAACCAAGCCAAATTTGACCTTGAACAACAACAATCAACAATAACAAATCTCGAAGTCGAATCAAAAGATTTCGACTACTCGAAAAGATCACAATGGCTAAGAGCAGCCGTTTTAGGAGCTAACGACGGATTAGTCTCTACAGCTTCGTTAATGATGGGAGTCGGCGCAGTCAAGCAAGACATCAAAGCGATGATCTTGACCGGTTTTGCCGGTTTGGTAGCCGGTGCTTGTAGCATGGCGATCGGAGAATTTGTCTCGGTTTATTCGCAATTAGACATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGAGGAAGACAAATTGATGATGATGATGAAGAGAAGGAAAGTTTGCCTAATCCATTACAAGCTGCAGCTGCATCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGAGATTATAAGGTGAGACTTGGTGTTGTTGTAGCTGCAGTAAGTGTTGCTTTGGTTGTTTTTGGTTGGTTTGGGGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTGTTTTGAGGGTTTTGGTTGGTGGTTGGGTGGCTATGTCCATCACTTTTGGGCTTACTAAGTTGATCGGCTCAAGTGGACTTTAG 642 0.4252 MASLNQAKFDLEQQQSTITNLEVESKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGRQIDDDDEEKESLPNPLQAAAASALAFSIGAMVPLLAAFFIRDYKVRLGVVVAAVSVALVVFGWFGAVLGKAPIFRSVLRVLVGGWVAMSITFGLTKLIGSSGL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0782 213 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 210 IPR008217 GO:0005384|GO:0030026
Tpr2g0782 213 CDD Nodulin-21 35 182 - -
Tpr2g0782 213 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 8 210 - -
Tpr2g0782 213 Coils Coil 4 24 - -
Tpr2g0782 213 Pfam VIT family 37 118 IPR008217 GO:0005384|GO:0030026
Tpr2g0782 213 Pfam VIT family 118 205 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0782 Tpr-Chr2 9470682 9471812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0782 5 213 Nodulin-like Gene Family AT3G43660 67.943 1.47e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0782 K22736 - gmx:100815165 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0782 2 9470682 9471812 Tpr1g0843 1 7123226 7124200 PCT