Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0763 ATGGAAATTGATGAAAGTTTATATACCCCTTTAAATTACCAGCTAAATGAAGTTGACCATGTTAATCATGTAACCCCATTTGCCAAAGTTGGATTCTTTAGTTTGATGTCATTTTGGTGGTTGAATCCGTTGATGAAAACGGGTCAAGAGAAAACACTTCAGGACGAAGATATGCCAAAGTTGCGAGAGTCTGACCGAACAGAAAAATGTTATGCATTGTTTATAGATCAACTGAATAGACAGAAGCAGCAGGACAAATCATCACGGTCATTGGTTTTATGGACAATAATCTTGTGCCATCGTAGAGAGATTTTGATATCGGCATTCTTTGCATTACTCAAGGTACTCGCAATCTCTTCTTGTCCTGTGATTTTGAATGCCTTTATTTTGGTGGCCGAGGGTAATAAAAGTTCGAAATATGAAAGTTATGTATTAGCCATCTCGCTTTTGTTTACGAAGATTTTAGAATCTCTATCCCAAAGGCAGTGGTATTTTCGCACTAGACTTATTGGTATGAAAATTAAATCATTACTCATTGCAGCCGTTTATAAGAAACAAATGAGGTTATCCAATGCTGCTAGATCGGTTCACTCCGGTGGTGAGATAATGAATTATGTGAATGTGGATGCTTATAGAATTGGAGAATTTCCATTTTGGTTTCACCATACATGGACAACAACCCTCCAACTATGTATCGCATTAGTAATTATTTTTCGTGCAGTTGGGCTCGCGACAATTGCATCATTTGTAGTGATAGTTTTGACTGTGATTTTAAATACTCCATTGGCAAAGTTACAACATAAGTTTCTAAGCAATCTTCTTGTGGCGCAAGATGAAAGGTTGAAGGCTAGTTCCGAAGCTCTAGTGAATGTTAAAGTGTTGAAGTTATATGCATGGGAAATGCATTTTAAAAATGCTATCGAAGGCTTAAGATACGTTGAACTCAAATGGTTATCTTCAGTGTTACTACAAAAAGCATACAATGTCATTTTGTTTTGGTTTTCGCCGTTTTTCATCTCTGCTGCAACATTCGGGGCATGTTACTTTTTGAAAGTTCCTTTACATGCAAATAATATTTTCACCTTTGTTGCAACAATACTCCTTTTGCAAGATCCGATTTCAACCATTCCAGATGTTATTGGAGTGATCATTCAAGCAAATATTGCATTTTCTCGGATTGTGAGATTCCTTGACGCGCCTGAGCTGCAGAGTTCAAATTTTAGTAAGAGTTGCTTCGATGAGAAGTTAAAGGGCTCAATTTTAATCAAATCTGCGGACTTTTCATGGGAATATAATATATTGAAGCCGACAATAAGTAACATAGATTTAAAGGCTAGTGTTGGACAAAAGATAGCCATTTGTGGTGAAGTTGGCTCAGGTAAATCAACTCTCTTAGCAGCAATTCTCGGAGAAATTCCTAATACTAACGGAAATATCGAAGTTTATGGCACGTTTGCTTATGTTTCTCAAACAGCATGGATACAAACAGGAACAATACAAGAAAATATTTTGTTTGGATCAGCTATGGATGTTCAAAGGTATCAAGAAACACTTCATAGGTCTTCACTGATGAAGGACCTTGAGTTGTTTCCATATGGTAATCTAACCGAGATAGGAGAGAGAGGTGTAAATCTAAGCGGGGGTCAAAAGCAGCGAATTCAACTTGCTCGAGCTTTTTATCAGAATGCCGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGACGCGCACACTGCCACTAATTTATTCAATGAATACGTATTGGAAGGACTTGCCGGAAAGACAGTCCTTCTTGTGACTCATCAAGTTGACTTTCTCCCTGCATTTGATTCTGTTTTGTTGATGTCAAATGGACAAATCCTGCAAGCTGCTCCTTACCATGATCTACTGACCTCTAGCCGAGAATTTACGGACCTTGTCAATGCTCACAAAGAGACTGCTGGTTCTGGTCGACTTGTAGATGTTACTTCATCGCAAAGACATTCAAGTTCTGATAGAGAGATTCAGAAAACTTTTACGGAGAAGCCGTTTAAAGCTTTAAACGGAGATCAATTAATTATGCAAGAAGAGAGGGAACGAGGAGACGCAGGGTTGAAGCCTTACTTACAATATCTCAATCAAAAAAGAGGCTATCTATACTTCTTTCTCGGTTCTCTTTCTCACCTGATGTTTGTGATTTGTCAGATATTGCAAAACTCGTGGATGGCTTCCCGTGTTGACGATCCTCAAGTCAACACATTACAATTGGTTGTAGTTTACTTGTTGATTGGAGTTACCTCTAATTTTTTCATGATAATCAGAAGTCTTCTTGCTGCTCTATTGGGTTTTCAATCATCAAAACATATATTCTCACAGCTAATGAACTCTCTTTTTCGAGCACCGATGTCTTTTTATGACTCTACACCTTTGGGAAGGATACTTAGTAGGGTTTCATCTGATTTAAGCATTGTGGATCTTGATATCTCATTTAACCTCACTTATGTCGTCGGATCAACTATAAGTTGTTACATGGATCTTATAGTTTTAACATCCTTCACTTGGCAAGTCTTGTTTGTCACTATACCAATGGCTTATGTTATTGTAAAGTTACAGAGACACTACTATGCCTGTGCAAAACAACTTATGCGGATGAATGGAACAACAAAATCCTCTGTAGCTAATCATGTAGCTGAAACTTTTGCTGGAGCTATGACAATAAGGGCTTTTGAGCAGGAAGATCGTTTTTGCGAAAACAATTTTAATCTAATTGATGTCAATGCCAGTGCTTTGTTTCACAGTTTTGCCTCAAATGAGTGGTTTATCCAACGTGTAGAAACAGTGTATGCCGTTGTTCTTACCTCTGCGGCACTTTGCATTGCTATGCTTCCATTTGGGACCTTAACATCTGGATTTATCGGTATGGCTCTTTCTTATGGCCTTTCTCTAAATGGTTCTTTAGTATATTCAATTCAAAGCCAATGCATTATGGCAAATTATATAGTATCTGTAGAAAGGATAAACCAGTATACTCATATACCAAATGAGGATCAAGAAGGAAATTGTCCTCCAGTTAATTGGCCAGTTGTAGGCAAAGTAGAAATACGCGATTTACAGATACGATACAGGCCGAAAGAACCACTTGTACTTCACGGTATCACTTGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGTAGAACAGGCAGCGGAAAATCCACTCTGATAGGTGCTTTGTTTCGTCTTGTGGAGCCGGCGGGTGGCAAAATTATAGTTGATGGCATAGACATCTCGTCTATTGGCCTTAATGATTTGAGGTCAAGTTTTGGTATTATACCTCAGGATCCTACCCTTTTCATTGGGACAGTTAGATATAACTTAGACCCTTTATCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTCAAAAGTGTCAGTTGCGAGAGTCTGTCAAAGATAAAGGCGGCTTAGATTCCTCAGTTACGCTGTCTTTTGTCGAAGATGGATCAAACTGGAGCATTGGACAAAGGCAACTATTCTGTTTAGGGCGTGCTCTTTTGAGGCGAAGTAAGATATTGGTGCTTGACGAAGCAACTGCGTCAATCGATAATGCAACTGATTTGATTCTTCAGAATACCATTAGAAAAGAGTTTGCTGATTGTACAGTGATCACAGTAGCACACAGGATACCGACTGTGATGAATTGCAATATGGTTCTTTCGATAAGCGACGGAAAATTGGTTGAGTATGATGAGCCAATGAAGTTAATGAAGAGAGAAAAATCATTGTTTGGACAACTTGTTAAGGAATATTGGTCTCATTTTCAGTAG 3813 0.3837 MEIDESLYTPLNYQLNEVDHVNHVTPFAKVGFFSLMSFWWLNPLMKTGQEKTLQDEDMPKLRESDRTEKCYALFIDQLNRQKQQDKSSRSLVLWTIILCHRREILISAFFALLKVLAISSCPVILNAFILVAEGNKSSKYESYVLAISLLFTKILESLSQRQWYFRTRLIGMKIKSLLIAAVYKKQMRLSNAARSVHSGGEIMNYVNVDAYRIGEFPFWFHHTWTTTLQLCIALVIIFRAVGLATIASFVVIVLTVILNTPLAKLQHKFLSNLLVAQDERLKASSEALVNVKVLKLYAWEMHFKNAIEGLRYVELKWLSSVLLQKAYNVILFWFSPFFISAATFGACYFLKVPLHANNIFTFVATILLLQDPISTIPDVIGVIIQANIAFSRIVRFLDAPELQSSNFSKSCFDEKLKGSILIKSADFSWEYNILKPTISNIDLKASVGQKIAICGEVGSGKSTLLAAILGEIPNTNGNIEVYGTFAYVSQTAWIQTGTIQENILFGSAMDVQRYQETLHRSSLMKDLELFPYGNLTEIGERGVNLSGGQKQRIQLARAFYQNADIYLLDDPFSAVDAHTATNLFNEYVLEGLAGKTVLLVTHQVDFLPAFDSVLLMSNGQILQAAPYHDLLTSSREFTDLVNAHKETAGSGRLVDVTSSQRHSSSDREIQKTFTEKPFKALNGDQLIMQEERERGDAGLKPYLQYLNQKRGYLYFFLGSLSHLMFVICQILQNSWMASRVDDPQVNTLQLVVVYLLIGVTSNFFMIIRSLLAALLGFQSSKHIFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDISFNLTYVVGSTISCYMDLIVLTSFTWQVLFVTIPMAYVIVKLQRHYYACAKQLMRMNGTTKSSVANHVAETFAGAMTIRAFEQEDRFCENNFNLIDVNASALFHSFASNEWFIQRVETVYAVVLTSAALCIAMLPFGTLTSGFIGMALSYGLSLNGSLVYSIQSQCIMANYIVSVERINQYTHIPNEDQEGNCPPVNWPVVGKVEIRDLQIRYRPKEPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDISSIGLNDLRSSFGIIPQDPTLFIGTVRYNLDPLSQHSDQEIWEVLQKCQLRESVKDKGGLDSSVTLSFVEDGSNWSIGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQNTIRKEFADCTVITVAHRIPTVMNCNMVLSISDGKLVEYDEPMKLMKREKSLFGQLVKEYWSHFQ* 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0763 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 643 IPR003439 GO:0005524
Tpr2g0763 1270 Gene3D ABC transporter type 1, transmembrane domain 679 1010 IPR036640 GO:0005524|GO:0016021
Tpr2g0763 1270 Gene3D ABC transporter type 1, transmembrane domain 76 397 IPR036640 GO:0005524|GO:0016021
Tpr2g0763 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 105 385 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0763 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1017 1259 IPR027417 -
Tpr2g0763 1270 CDD ABCC_MRP_domain1 420 620 - -
Tpr2g0763 1270 Pfam ABC transporter transmembrane region 105 372 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0763 1270 Pfam ABC transporter transmembrane region 714 974 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0763 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 415 643 IPR027417 -
Tpr2g0763 1270 CDD ABCC_MRP_domain2 1024 1247 - -
Tpr2g0763 1270 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 712 992 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0763 1270 CDD ABC_6TM_ABCC_D1 106 393 IPR044746 GO:0140359
Tpr2g0763 1270 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 2 1270 - -
Tpr2g0763 1270 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 1270 - -
Tpr2g0763 1270 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1028 1263 IPR003439 GO:0005524
Tpr2g0763 1270 Gene3D - 1011 1264 IPR027417 -
Tpr2g0763 1270 Gene3D - 398 661 IPR027417 -
Tpr2g0763 1270 Pfam ABC transporter 439 572 IPR003439 GO:0005524
Tpr2g0763 1270 Pfam ABC transporter 1043 1194 IPR003439 GO:0005524
Tpr2g0763 1270 SUPERFAMILY ABC transporter transmembrane region 701 1009 IPR036640 GO:0005524|GO:0016021
Tpr2g0763 1270 SUPERFAMILY ABC transporter transmembrane region 89 401 IPR036640 GO:0005524|GO:0016021
Tpr2g0763 1270 SMART AAA_5 1052 1238 IPR003593 -
Tpr2g0763 1270 SMART AAA_5 447 620 IPR003593 -
Tpr2g0763 1270 CDD ABC_6TM_ABCC_D2 711 1004 IPR044726 GO:0140359
Tpr2g0763 1270 ProSitePatterns ABC transporters family signature. 545 559 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0763 Tpr-Chr2 9205654 9210918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0763 384 631 Calmodulin-binding Proteins AT2G36910 27.170 3.57e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0763 K05666 - gmx:100811468 1913.27