Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0762 ATGAAGGATTTTCGGAGCCTAATTGGCGGGGACTCTAGCTGTTCTGAGACTAGAGGAAATCCTTTCTGTTATGATTTCAAGAGTTTGAAAGATCCTTCTTCATGCAATAACTATTTCTTGGTAATTTTCTTTGATTTGTTCTTGCTGATTATGCTGTCATTCACGATGTTCCTGAAGTCTTCCTTGAGACCCTTTTGGAGTCAAGTAAGATATTCAAACTTGCAGCTAGTTTCTGCTATAGCCAATGGCTCTCTTGGTTTGTTGCATTTATGCTTAGGAATTTGGGTTTTAGAGGAGACATTAAGGAAAACTCACAAAACATTTCCTCTTAATTTGTGGTTGGTAGAATTCTTTCATGGACTCACATGGTTGTTAGTAGGTTTAACTATAAGTCTTCGGAAAAAACAACTTCGAAGAGCATGGTTGTGGCTATTTTCTATTCTCGCATTCTTTGCTTCTGGTATATTATGTGTTTTATCCATGTCTTATGCAATTGAAAGAAGAGACTTGTCCCTCAAGGAAGCTTTAGATGTTATAACTTTTCCGGGATCAACTTTGCTTTTGTTATGTACTTACAAAGTATGTAAACGTGAAGATTGCGATGCAGACCGAGAAACTTCTGAAAGGCTTTATGTTCCCTTAAATAGCGACTTCGATGATGTTTCTCAATGTCATGTCACGCCATTTGCCAAAGCTGGATTCTTTAGTAAGATATCATTTTGGTGGTTGAATCCATTGATTAAAAAGGGACAAGAAAAAACACTTCAAGATGAGGATATCCCGAAGTTAGGAGAGTGTGAACGAGCAGAAAGTTGTTATTTGTCATTTGTAGAACAATTAAGGATACAAAGAGAAAAAGAATCATCATCACATTCATCGGTATTGTGGACGATCATAATGTGCCACCGAAGAGAGATTTTGATAACAGGATTCTTTGCTTTGCTCAAGATACTTGCTATATCTTGCGGCCCTCTACTTCTGAATGCTTTTATATTGGTTTCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATATATTGGCTATATCACTCTTCTTCATAAAGATCATAGAATCCTTAGCACAAAGACAATGGTATTTTCGCAGTAGAATTGTTGGGATGAAAGTTAGGTCACTACTTACGGCAAACATTTATAAAAAAACATTAACGCTATCCAATTCTGCTAGATTGATTCACTCTGGTGGTGAGATAATGAATTATATAACCGTGGATGCATATAGAATTGGAGAATTTCCATTCTGGTTTCACCAAACATGGACAACGATCCTCCAACTGTGTATTGCGTTAGTAATTCTTTTCCGAGCAATTGGACTAGCAACAATAGCTTCAATGGTTGTGATAGTTCTCACAGTGCTTTGCAACACTCCACTAGCAAAGTTACAACACAAGTTTCAGAGCGAACTTATGGTGGCACAAGATGAGAGATTGAAGGCGAGTTCTGAGGCTCTTGTGAATATGAAAGTGCTAAAGTTATATGCATGGGAAAACCATTTTAAAAATGCTATAGAAAAGTTAAGAAATGCGGAACTCAAATTGATATCTGCAGTGCAATTAAGTAAGGCGTACCTTCTCTTTCTCTTTTGGACCTCGCCGGTGTTGGTGTCTGCTGCTTCTTTTCTAGCATGTTACTTCCTTAAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTAGCAACTCTACGCCTAGTTCAAGAGCCAATTACAGGTATCCCGGATGTAATTACGGTGATCATTCAAGCAAAAGTTGCATTTGCTCGGATTAGTAATTTCCTTGAGGCACCAGAACTACAGAATGCAAATTTAAAGAACAGGCGCTTTAATGACAACCACAAAGGCTCAGTTTTAATAAAATCAGCCGACTTTTCATGGGAAGGTAATGTATCAAAGCCAACACTAAGAAACATAAATTTGGACATTAGACGCGGACAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCCGGAAAATCAACACTTTTAGCAACAATTCTAGGAGAAGTTCCTAATACAAAGGGAACTATTGGTGTATATGGGAAGTTTGCATATGTTTCTCAAACTGCATGGATCCAAACCGGTACAATACGAGAAAATATTTTGTTTGGATCTGAGTTGGATGATCAAAGATATCAAGAAACACTTCAAAGATCTTCATTGGTAACGGACCTTGAGTTGCTTCCATATGGTGACCTCACTGAAATAGGCGAGAGAGGAGTTAATTTAAGTGGAGGTCAGAAGCAGCGAATTCAACTAGCTCGAGCTCTTTATGAGAATGCTGATATATATCTCTTGGATGATCCATTCAGTGCCGTTGATGCACATACTGCAAAAAGTTTATTTAATGAATATATCATGGACGGACTCAAAGGAAAAACTGTCTTACTCGTGACTCATCAAGTTGACTTCCTCCCAGCATTTGATACTGTTTTGTTGATGTCAGACGGGGTAATCCTACAAGCCGATCCATATAACCAGCTATTAACCACAAGCCGAGAATTCCAAGATCTTGTCAATGCTCACAAGGAGACTGCTGGTTCAAACCAGCCTGTGAATTTTACTTTTACACAAACTTCTAAAAAGGTTACACAAACTTTCGTGGAAAAGCAGATTATAGAAACAAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGAAAGGAGACACAGGATTGAAGCCTTACTTACAATATATGAATCAGATGAAAGGCTATATATTCTTCATTGTGGCTTCACTTGGTCACCTTATTTTTGTGGTTTGTCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAATCCCCGCATCAGCACGTTGCAGTTGATTTTAGTTTACTTCCTACTTGGAGTTTCATCAGCATTTTTCATGTTAACCAGAAGTCTCTTTGTAGTTGCTTTGGGTCTTCAATCTTCAAAGTACTTATTTTTACAGTTGATGAACTCTCTCTTTCGAGCACCGATGTCTTTTTATGACTCTACACCATTGGGAAGGATACTTAGTAGGGTTTCATCTGATCTGAGCATTATGGATGTTGACGTCCCATTTAGCCTCACATTTGTGGTGGGAGCAACTATGAATGTTTGTTCTAGTCTCGGAGTTTTAGCAGTTGTCACTTGGCAAGTATTGATTGTGGCTATACCAATGGTTTGTGTTACAATTCGCTTGCAGAGATACTACTTTGCCTCAGCAAAAGAAGTGATGCGGATGAATGGCACAACAAAATCCTACTTAGCTAATCACATAGCTGAAACTGTTGCCGGATCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTGAGAAGAATCTTGATCTAATCAACATTAATGCTAGTGCATTTTTTCATAATTTTGCCTCAAATGAGTGGTTGATCCTACGGTTGGAAACAATAAGTGCAGGTCTTCTTGCCTCAGCAGCGCTATGCATGGTCATACTTCCAACAGGGACTTTCACCTCTGGATTCATTGGTATGGCTCTATCTTATGGCCTTACACTAAATTCTTCCTTAGTATTTTCAATTCAAAGTCAATGCACTATTGCAAGTCAGATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCCGAAGAAATAGTCGAAGTAAATCGTCCTCCTCTGAATTGGCCAGTTGCAGGCAAAGTAGAAATACAAGACTTGAAGATACGATACAGGCCCGATGGACCACTTGTTCTTCATGGAATCACATGCATATTTGAAGCAACTCACAAGATTGGTATCGTTGGCAGAACAGGCAGTGGGAAATCCACTCTTATTAGCGCTTTATTTCGTCTTGTGGAACCGGAAGGAGGAAAAATTGTAGTTGATGGAATAGACATCTCATCTATTGGCCTTCATGATTTGAGGTCACGATTTGGGATTATACCTCAAGATCCTACCCTTTTTCACGGGACAGTAAGATATAACTTAGACCCTTTATCTCAACACACTGATAAAGAGATATGGGAGGTTCTCGGAAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGACGAGGGCTTAAACTCGTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGCGAAGAAGTAGGATATTGGTGTTGGACGAAGCAACTGCTTCAATTGACAATTCAACTGATATGATTCTACAGAAAACCATTAGAACCGAGTTTGCGGATTGTACAGTGATCACAGTAGCACACAGGATACCGACCGTGATGGATTGCACTATGGTTCTTGCAATCAGTGATGGAAAATTGGCGGAGTATGACGAGCCAATGAGCTTAATGAAGAGAGAAGAATCGTTGTTCGGGAAGCTTGTCAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCGCATTAA 4422 0.389 MKDFRSLIGGDSSCSETRGNPFCYDFKSLKDPSSCNNYFLVIFFDLFLLIMLSFTMFLKSSLRPFWSQVRYSNLQLVSAIANGSLGLLHLCLGIWVLEETLRKTHKTFPLNLWLVEFFHGLTWLLVGLTISLRKKQLRRAWLWLFSILAFFASGILCVLSMSYAIERRDLSLKEALDVITFPGSTLLLLCTYKVCKREDCDADRETSERLYVPLNSDFDDVSQCHVTPFAKAGFFSKISFWWLNPLIKKGQEKTLQDEDIPKLGECERAESCYLSFVEQLRIQREKESSSHSSVLWTIIMCHRREILITGFFALLKILAISCGPLLLNAFILVSEGNESFKYEGYILAISLFFIKIIESLAQRQWYFRSRIVGMKVRSLLTANIYKKTLTLSNSARLIHSGGEIMNYITVDAYRIGEFPFWFHQTWTTILQLCIALVILFRAIGLATIASMVVIVLTVLCNTPLAKLQHKFQSELMVAQDERLKASSEALVNMKVLKLYAWENHFKNAIEKLRNAELKLISAVQLSKAYLLFLFWTSPVLVSAASFLACYFLKVPLHASNVFTFVATLRLVQEPITGIPDVITVIIQAKVAFARISNFLEAPELQNANLKNRRFNDNHKGSVLIKSADFSWEGNVSKPTLRNINLDIRRGQKVAICGEVGSGKSTLLATILGEVPNTKGTIGVYGKFAYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLVTDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYENADIYLLDDPFSAVDAHTAKSLFNEYIMDGLKGKTVLLVTHQVDFLPAFDTVLLMSDGVILQADPYNQLLTTSREFQDLVNAHKETAGSNQPVNFTFTQTSKKVTQTFVEKQIIETNGNQLIKQEEREKGDTGLKPYLQYMNQMKGYIFFIVASLGHLIFVVCQILQNSWMAANVDNPRISTLQLILVYFLLGVSSAFFMLTRSLFVVALGLQSSKYLFLQLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDVDVPFSLTFVVGATMNVCSSLGVLAVVTWQVLIVAIPMVCVTIRLQRYYFASAKEVMRMNGTTKSYLANHIAETVAGSVTIRAFEEEDRFFEKNLDLININASAFFHNFASNEWLILRLETISAGLLASAALCMVILPTGTFTSGFIGMALSYGLTLNSSLVFSIQSQCTIASQIISVERLNQYMHIQSEAEEIVEVNRPPLNWPVAGKVEIQDLKIRYRPDGPLVLHGITCIFEATHKIGIVGRTGSGKSTLISALFRLVEPEGGKIVVDGIDISSIGLHDLRSRFGIIPQDPTLFHGTVRYNLDPLSQHTDKEIWEVLGKCQLREVVQEKDEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDMILQKTIRTEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMSLMKREESLFGKLVKEYWSHFQSAESH* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0762 1473 Pfam ABC transporter 640 774 IPR003439 GO:0005524
Tpr2g0762 1473 Pfam ABC transporter 1245 1392 IPR003439 GO:0005524
Tpr2g0762 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 1473 - -
Tpr2g0762 1473 CDD ABCC_MRP_domain2 1225 1445 - -
Tpr2g0762 1473 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Tpr2g0762 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0762 1473 Gene3D - 1210 1462 IPR027417 -
Tpr2g0762 1473 SMART AAA_5 1253 1445 IPR003593 -
Tpr2g0762 1473 SMART AAA_5 649 822 IPR003593 -
Tpr2g0762 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 914 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0762 1473 Gene3D ABC transporter type 1, transmembrane domain 278 604 IPR036640 GO:0005524|GO:0016021
Tpr2g0762 1473 Gene3D ABC transporter type 1, transmembrane domain 875 1209 IPR036640 GO:0005524|GO:0016021
Tpr2g0762 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 845 IPR003439 GO:0005524
Tpr2g0762 1473 SUPERFAMILY ABC transporter transmembrane region 295 600 IPR036640 GO:0005524|GO:0016021
Tpr2g0762 1473 CDD ABCC_MRP_domain1 622 821 - -
Tpr2g0762 1473 CDD ABC_6TM_ABCC_D2 909 1202 IPR044726 GO:0140359
Tpr2g0762 1473 Gene3D - 617 851 IPR027417 -
Tpr2g0762 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1461 IPR003439 GO:0005524
Tpr2g0762 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1218 1453 IPR027417 -
Tpr2g0762 1473 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524
Tpr2g0762 1473 SUPERFAMILY ABC transporter transmembrane region 906 1209 IPR036640 GO:0005524|GO:0016021
Tpr2g0762 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 845 IPR027417 -
Tpr2g0762 1473 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 67 1473 - -
Tpr2g0762 1473 Pfam ABC transporter transmembrane region 911 1174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0762 1473 Pfam ABC transporter transmembrane region 307 569 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0762 Tpr-Chr2 9193352 9200750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0762 616 853 Calmodulin-binding Proteins AT2G36910 31.128 9.03e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0762 K05666 - gmx:100787314 2276.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0762 2 9193352 9200750 Tpr1g0829 1 6901733 6909134 PCT