Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0760 ATGAAGGATTTTTGGAGCATAATTTGTGGGAACTCTTCAAATGGTGAAAGCCTTTATGATCCTTTAAATGGCCAGTTAAATGAAGTTGATACTGTTAGCAATGTAACACCATTTTCCAAAGCTGGATTCTTTAGTAAGATTTCATTTTGGTGGTTGAATACGTTGCTGAAAAGAGGTCAAGAAAAGACACTTCTCGATGAGGATATCCCCGAGTTAAGAGAGTCTGACCGAGCAAAAAGTTGTTATTTTTCGTTTGTAGAACAATTAAACAAACAAAATCAACACGAGCCACCATCACATTCTTCGATTTCATGGACAATAATTTTGTGCCACCGAAGAGAGATTTTGATAACAGGATTGTTTGCTTTGCTCAAGGTACTCGCTATATCTTGTGGCCCTCTACTTCTAAATGCTTTTATATTGTTTTCCGAGGGTAATGAAAGTTTCGAATATGAAGGATATATATTGGCCATATCACTCTTCTTCATAAAGATCATAGAATCCCTATCACAAAGACAATGGTATTTTCGCAGTAGACTTGTTGGGATGAAAGTTCGATCACTACTTACTGCCGCCATTTATAAAAAAATATTAAGGCTATCGAATTCTGCTAGACTGGTTCACTCTAGTGGTGAGATAATGAATTATATAACTGTAGATGCTTATAGAATTGGAGAATTTCTATTTTGGTTTCACAAGACTTGGACAACAATTCTTCAACTGTGTATTGCATTAGTAATTCTTTTCCGCGCAATTGGACTAGCAACAATAGCCTCATTGGCGGTGATAGTTCTCACCGTGCTTTGCAACACTCCACTAGCAAAGTTACAACACAAGTTTCAGAGAAAACTAATGGTGGCACAAGATGAGAGATTAAAAGCTAGTTCTGAGGCACTTATGAATATGAAAGTGTTGAAGTTATATGCATGGGAAACCCATTTTAAAAACGCCATAGATTACTTACGAAACACGGAACTCAAATTGTTATCTGCAGTGCAATTAAGAAGAACGTACCTTGTCTTTCTTTTTTGGACATCGCCGATGTTGGTGTCTTCTGCTTCCTTTTTGGCATGTTACTTCTTGAAAGTTCCTTTGCATGCAAGTAATGTTTTCACCTTCGTGGCAACTTTGCGCCTTGTTCAAGATCCAATTACAGGCATCCCAGATGTTATTGCAGTGGTTATTCAAGCAAAAGTTGCATTTGCTAGGATTGTTAATTTTCTCGAGGCACCAGAACTGCAAAGTGAAAATTTTAACAACAGATGCTTAAATGATAACATTAAAGGCTCAGTTTTGATCAAATCGGCTGACTTTTCATGGGAAGGTAATTTATCAAAGCCAACACTAAGAAACATAAATTTGGACGTTAGACGCGGACAAAAGGTGGCTATCTGTGGAGAAGTTGGCTCAGGAAAATCAACCCTCTTAGCAACAATTCTAGGAGAAGTTTCAAAGACACAGGGAACTATTGATGTTTATGGGAAGTTTGCATATGTTTCTCAAACAGCGTGGATACAAACAGGTACAATCCGGGAAAATATTTTGTTTGGGTCGGTGTTTGATGATCACAGATATCACGAAACACTTCAAAGGTCTTCACTGATAAAGGACCTTGAGTTGCTTCCCTATGGTGACCTCACCGAAATAGGTGAGAGGGGAGTAAATTTAAGTGGAGGTCAAAAGCAGCGAATTCAACTTGCTCGAGCTCTTTATCAGAATGCAGATATATATCTATTAGATGATCCATTTAGTGCTGTTGATGCGCATACTGCAAAAAAATTGTTTAATGAATATATCATGGAAGGACTCAAAGGGAAAACAGTCTTACTCGTGACACATCAAGTCGACTTCCTCCCAACGTTTGATTCTATTTTGTTGATGTCAGATGGGGGAATTCAACAAGCTGGTCCATATAACCATCTACTAACATCCAGTCAAGAATTCCATGACCTTGTCAATGCTCACAAAGAGACTTCGGGTTCTGACCAACTTGCGAGTACTACTTTTCCGCAGAGACATTCAACTTCTACAAAGATTACGCAGGCTTTCGTGTTGAAGCAATTTAAAGAACCAAATGGAAATCAATTCATTAAGCAAGAAGAAAGAGAGAAAGGAGACACAGGATTGAAGCCTTACTTACAATATTTGAATCAGATGAAAGGCTATATATTCTTCTTCGCGGCTTCCCTTTGTCACCTTATTTTCGTTGTCTGTCAAATATTGCAAAACTCATGGATGGCTGCTAATGTTGATAATCCTCGTGTCAGCACGTTGCGATTGATTTTAGTTTATTTACTCATTGGTGTTTCTTCAGTATTTTTCTTGTTGATCAGAAGTCTACTTTTAGTTGCTTTGGGTCTTCAATCATCGAAGTATTTATTTCTACAACTGATGAACTCCCTCTTTCGTGCACCGATGTCCTTTTACGACTCTACACCATCAGGAAGGATACTTAGTAGGGTTTCGTCTGATCTGAGCATTATGGATAATGACATCCCATTCAGCCTCACTTTTGCAGTGGCAGGAACTCTAGTTTTTTATTCCAGTCTTACAGTTTTGGCAGTTGTTACTTGGCAAGTCTTAATTGTGGTTATTCCGATGGTTTATGTTGCTGTTCGATTGCAGAGATACTACTTTTCCTCAGCAAAAGAAGTAATGAGGATGAATGGCACAACAAAATCATTTTTAGCTAACCATGTAGCTGAAACTGTTGCTGGAGCTGTGACAATAAGAGCTTTTAAGGAGGAGGTTCGGTCTTTTGAGAAGAACCTCGGTTTAATTGATATTAATGCTGGTGCTTTTTTCCATAGTTTTGCCGCAAATGAGTGGTTAATCCAACGGTTAGAAACAATCAGTGCAGTTGTACTCACCGCTGCGGCACTTTGCATGGTTATGCTCCCCACTGGAACATTCTCCTCGGGAATTATTGGCATGGCTCTATCTTATGGCCTGTCACTAAATGCTTCCTTAGTATTTTCAATTCAAAATCAATGCACTCTTGCAAATCACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCAGAAGAAATAGTAGAAGAAAATCGTCCCCCTTCGAATTGGCCAGTTACAGGAAAAGTAGAAATAAATGATTTGAAGATACGATACAGGTCCGATGGACCATTTGTACTTCATGGGATTACATGCACATTTAAAGCACGACACAAGATCGGTATTGTTGGAAGAACAGGCAGCGGGAAATCAACACTTATTAGTGCTTTGTTTCGTCTTGTGGAGCCAGCAGACGGAAAGATTATTGTTGACGGAATTGACATATCATCCATCGGCCTTCATGACTTGAGGTCATGTTTTGGGGTTATACCTCAGGATCCTACACTTTTTAATGGGACAGTAAGATATAACTTGGACCCTGTATCGCAGCATACTGATCACGAGATATGGGAGGTTCTTCGGAAGTGTCAATTGCGAGAAGTTGTTCAAGGGAAGGAAGAGGGTTTAAACTCCTCAGTTGTTGAGAATGGATCAAACTGGAGTATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCACTTTTGCAAAGAAGTAGGATATTGGTGTTGAACGAAGCAACTGCTTCAATTGATAATTCAACTGATATGATTCTTCAGAAAACCATTAGAACCGAGTTTGCGGATTGTACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCAGTATGGTTCTTTCAATCAGTGATGGAAAATTGGCGGAGTATGATGAGCCGATGATCTTGATGAAGAGAGAAGAATCATTGTTCAGGCAACTTGTCAAAGAATACTGGTCTCACTCTCAGTCTGCAGATTCGCATTGA 3858 0.3906 MKDFWSIICGNSSNGESLYDPLNGQLNEVDTVSNVTPFSKAGFFSKISFWWLNTLLKRGQEKTLLDEDIPELRESDRAKSCYFSFVEQLNKQNQHEPPSHSSISWTIILCHRREILITGLFALLKVLAISCGPLLLNAFILFSEGNESFEYEGYILAISLFFIKIIESLSQRQWYFRSRLVGMKVRSLLTAAIYKKILRLSNSARLVHSSGEIMNYITVDAYRIGEFLFWFHKTWTTILQLCIALVILFRAIGLATIASLAVIVLTVLCNTPLAKLQHKFQRKLMVAQDERLKASSEALMNMKVLKLYAWETHFKNAIDYLRNTELKLLSAVQLRRTYLVFLFWTSPMLVSSASFLACYFLKVPLHASNVFTFVATLRLVQDPITGIPDVIAVVIQAKVAFARIVNFLEAPELQSENFNNRCLNDNIKGSVLIKSADFSWEGNLSKPTLRNINLDVRRGQKVAICGEVGSGKSTLLATILGEVSKTQGTIDVYGKFAYVSQTAWIQTGTIRENILFGSVFDDHRYHETLQRSSLIKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKKLFNEYIMEGLKGKTVLLVTHQVDFLPTFDSILLMSDGGIQQAGPYNHLLTSSQEFHDLVNAHKETSGSDQLASTTFPQRHSTSTKITQAFVLKQFKEPNGNQFIKQEEREKGDTGLKPYLQYLNQMKGYIFFFAASLCHLIFVVCQILQNSWMAANVDNPRVSTLRLILVYLLIGVSSVFFLLIRSLLLVALGLQSSKYLFLQLMNSLFRAPMSFYDSTPSGRILSRVSSDLSIMDNDIPFSLTFAVAGTLVFYSSLTVLAVVTWQVLIVVIPMVYVAVRLQRYYFSSAKEVMRMNGTTKSFLANHVAETVAGAVTIRAFKEEVRSFEKNLGLIDINAGAFFHSFAANEWLIQRLETISAVVLTAAALCMVMLPTGTFSSGIIGMALSYGLSLNASLVFSIQNQCTLANHIISVERLNQYMHIQSEAEEIVEENRPPSNWPVTGKVEINDLKIRYRSDGPFVLHGITCTFKARHKIGIVGRTGSGKSTLISALFRLVEPADGKIIVDGIDISSIGLHDLRSCFGVIPQDPTLFNGTVRYNLDPVSQHTDHEIWEVLRKCQLREVVQGKEEGLNSSVVENGSNWSMGQRQLFCLGRALLQRSRILVLNEATASIDNSTDMILQKTIRTEFADCTVITVAHRIPTVMDCSMVLSISDGKLAEYDEPMILMKREESLFRQLVKEYWSHSQSADSH* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0760 1285 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 12 1285 - -
Tpr2g0760 1285 SUPERFAMILY ABC transporter transmembrane region 105 409 IPR036640 GO:0005524|GO:0016021
Tpr2g0760 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 654 IPR027417 -
Tpr2g0760 1285 SMART AAA_5 1065 1248 IPR003593 -
Tpr2g0760 1285 SMART AAA_5 458 631 IPR003593 -
Tpr2g0760 1285 Gene3D - 429 662 IPR027417 -
Tpr2g0760 1285 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 726 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0760 1285 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 12 1285 - -
Tpr2g0760 1285 CDD ABCC_MRP_domain1 431 630 - -
Tpr2g0760 1285 CDD ABC_6TM_ABCC_D1 117 404 IPR044746 GO:0140359
Tpr2g0760 1285 CDD ABC_6TM_ABCC_D2 721 1014 IPR044726 GO:0140359
Tpr2g0760 1285 Gene3D - 1022 1275 IPR027417 -
Tpr2g0760 1285 Pfam ABC transporter 449 583 IPR003439 GO:0005524
Tpr2g0760 1285 Pfam ABC transporter 1056 1204 IPR003439 GO:0005524
Tpr2g0760 1285 SUPERFAMILY ABC transporter transmembrane region 712 1022 IPR036640 GO:0005524|GO:0016021
Tpr2g0760 1285 Pfam ABC transporter transmembrane region 723 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0760 1285 Pfam ABC transporter transmembrane region 116 373 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0760 1285 Gene3D ABC transporter type 1, transmembrane domain 687 1021 IPR036640 GO:0005524|GO:0016021
Tpr2g0760 1285 Gene3D ABC transporter type 1, transmembrane domain 86 413 IPR036640 GO:0005524|GO:0016021
Tpr2g0760 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1272 IPR027417 -
Tpr2g0760 1285 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 116 396 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0760 1285 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1273 IPR003439 GO:0005524
Tpr2g0760 1285 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 654 IPR003439 GO:0005524
Tpr2g0760 1285 ProSitePatterns ABC transporters family signature. 556 570 IPR017871 GO:0005524
Tpr2g0760 1285 CDD ABCC_MRP_domain2 1037 1257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0760 Tpr-Chr2 9161023 9166320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0760 412 642 Calmodulin-binding Proteins AT2G36910 31.579 1.34e-27 119