Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0759 ATGGATGATTTTTGGAGCATGATTTGTGGAGACTATGATTGTTCTAAGAATGAAGAAAAGTCTTTATGTTATGATTTAACTCTTTTGAAAGATCCTTCTTCATGTATCAACCATGTCTTAGTTATTTTCTTTGATGTTTTAGTGTTGATATTGATATTCATCATGATCTTAAAGTCTTCTTTGAGACCCTATTGGAGGAATCAAGTAAGATATTCAAACTTGCAGCTAGTTTCTGCCATAACCAATGGATTTCTTGGGATATTGCATTTATCTTTAGGAGTATGGTTTTTAGAGGAGAGTTTAAGAAAAACTCACAAAGCATTTCCTCTTCATTGGTGGTTGCTAGAACTCTTTCATGGTTTCACTTGGTTAGTTGTAAGTTTAACCATTAGTCTTCGGATAAAACAAATCGCAAAAGCATCGATGTGGTTTTTTTCTATGCTTATATTCTTTGTTTCTGGTATATTATGTGCATTATCCATGTCTTATGCAATTGAAAGTAGAGAATTGTCACTCAAGGTAGCTTTTGATATTATATCATTTCCAGGAGCAGCTTTGTTGCTTTTGTGCACATACAAACGATGTAAATGTAACGATACTGACAGAGAAATTGATGATGATAGTCTTTGTACTCCTTTGAATGGCGAGTTCAATGAAACTAATCTTACTAGCCATGTTACTCCATTTGACAAAGCTGGATTCTTTAATAAGATTTGGTTTTGGTGGTTGAATCCGTTGATGAAAACGAGTCAGGAGAAAACACTTCAAGACGAGGATATTCCAAACTTGAGAGAGTCTGACCGTGCAGAAATTTGTTATGTGTCGTTTATGGAACAGTTAAACAAAGAAAGACAATGTGAAACATCGTATCAGTCATCGGTTTTATGGACAATCATTTCGTGCCACCGAAGAGAGATTTTGGTAACCGGATTCTTTGCATTGCTTAAGGTACTCGCTATATCTTCTACTCCTTTACTTCTGAATGCCTTTATATTGGTTGCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATGTGTTGTCTGTATCACTCTTTCTTATAAAAATCATAGAATCACTATCACAAAGACAATGGTATTTCAACACTAGACTTGTTGGGATGAAAGTTAGATCACTACTTAATGCAGCCATTTATAAGAAAATATTAAGGCTATCCAATTCTGCAAGAATGATTCATTCTGGTGGCGAGATAATGAATTATATGATCGTTGATGCATATAGAATTGGAGAATTTCCGTTCTGGTTTCACCAGACATGGACAACAATCCTCCAATTGTGTATTGCATTAGTAATTCTTTTCCGCACAATTGGATTAGCGACACTAGCATCATTGGCAGTAATAGTTTTTACCGTGATTTGCAATTATCCACTAGCAAAGTTACAACATAAGTATCAGAGCAAACTTATGGTGGCACAAGATGAGAGATTAAAGGCGAGTTCTGAAGCTCTTGTGAATATGAAAGTGCTGAAGTTGTATGCATGGGAAAAACATTTTAAGAATGTTGTAGATTTCTTAAGAAATGCGGAACTCAAATTGTTATATGCAGTGCAATTAAGAAGAACATACAATACCTTTCTCTTTTGGACCTCTCCAATGTTGGTGTCTACTGCTTCTTTTCTAGCATGTTACTTCTTGAATGTTCCTTTGAATGCAAGTAATGTTTTCACTTTTGTGGCAACTGTGCGCCTTGTTCAAGAGCCAATTACCAGTATCCCAGATGTTATTGCGGTGGTCATTCAGGCAAAAGTTGCATTTGCTCGAATTGTTAATTTCCTTGATGCACCAGAACTGCAGGGTGAAAAATTGAAGAACAGATGCTTCAATGATGACCTCAAAGGCTCCATTTCAATAAAATCTGCTAACTTTTCATGGGAAGGTAATGTATCAAAGCCGACACTAAGGAGCATAAATTTAGAGGTTCGACATGGCCAAAAAGTGGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTAGCAACAATTCTTGGAGAAGTACCTAAAACACAGGGAAATATTGATGTTTATGGGAGGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGTACAATACGGGAAAATATTTTGTTCGGATCTGAATTGGAAGATCAAAGATATCAAGAAACACTTCAGAGGTCTTCACTGGTAAAGGACTTTGAGTTGCTTCCCTACGGTGACCTAACCCAAATAGGTGAAAGAGGAGTTAATTTAAGTGGAGGTCAAAAGCAGCGAATCCAACTTGCTCGAGCTCTTTATCAGAATGCTGATATATATCTATTAGATGATCCATTTAGTGCTGTTGATGCGCATACTGCAAAAAATTTGTTTAATGAATATATCATGGAAGGTCTCAAAGGGAAAACAGTCTTACTTGTGACTCATCAAGTCGACTTCCTCCCTGCGTTTGATTCTGTTTTGTTGATGTCAGACGGGGTAATCCTACAAGCTGGTCCATATAACGAGCTATTGACGTCAAGCAAAGAATTCAATGACCTTGTCAATGCTCACAAGGAGACTGCTGGTTCTAACCAGCAGCTTGTCGATGTTACTTCTTCTAAGCAATATTCAACTACTAGAAACGTTAAACAAGATCTCGTGGAAAAACAGTTTAAAGAAACAAATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGAAAGGAGATGCAGGGTTGAAGCCTTACTTACAATATTTGAATCAGATGAAAGGCTATATATTCTTCTCGATGGCTTCGCTTTGTCATATTCTTTTTGTTACTTGTCAGATATTGCAAAACTCGTGGATGGCTGCTAATGTTGACAATCCGCTTGTCAGCACATTGAAATTGATTTTAGTTTATTTCCTTATCGGTGCTATTTCGACAGTTTTCTTGTTCACCAGAAGTCTACTTGTAGTAGCTTTAGGTCTTCAATCATCAAAATATTTATTTTCACAGTTGATGAACTCCCTCTTTCGTGCACCTATGTCATTTTACGACTCGACACCATTGGGAAGGATACTTAGTAGGGTCTCATCGGATATGAGCATTACGGATCTTGACATTCCATTTAGTCTCACATTTGCTGTCGGAGGAACCATAGTTTTTTACTCTAGTCTTACAGTTTTGGCAGTTGTCACATGGCAAGTCTTGATTGTGGCTATACCAATGGTTTATGTTGCTATCCGCATGCAGAGATACTATTTTACCTTAGCGAAAGAAGTGATGCGGATAAATGGCACAACAAAATCATCATTAGCTAATCATGTAGCTGAAACTGTTGCGGGAGCTACAACAATAAGGGCTTTTGAGGAGGAAGATCGTTCTTTTGAGAAGAACCTTGGTCTAATTGATATTAATGCAAGTGCTTTTTTCCATAGTTTTGCCTCAAATGAGTGGTTGATCCAGCGGTTAGAAACAATCAGTGCGGTTGTTCTTACCGCTGCAGCACTTTGCATGGTTATGCTCCCTCCTGGAACTTTTACCTCAGGAATTATTGGGATGGCACTATCGTATGGCCTCTCATTAAACAATGCCTTAGTATTTTCAATTCAAAATCAATGCACTCTTGCAAATTACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCCGAAGAAATAGTAGAAGGAAATCGTCCTCCTATGAATTGGCCCGATGCAGGCAAAGTAGAAATAAATGACTTGAAGATACGATACAGATCCGATGGACCACTCGTACTTCATGGGATCACGTGCACATTTAAAGCAGGTCACAAGATTGGTATTGTTGGCAGAACAGGCAGTGGGAAATCGACTCTTATCAGTGCATTATTTCGTCTTGTGGAACCAGCAGGAGGAAAAATTGTAGTTGATGGAATAGACATATCATCTATTGGCCTTCATGATTTGAGGTCGCGTTTTGGGGTTATACCTCAGGATCCTACCCTCTTTGATGGGACAGTAAGATATAATTTGGACCCTTTATCTCAACACACTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAAGTTGTCCAAGGAAAAGAAGAGGGTTTAAATTCTTCAGTTGTCGAAGATGGATCAAATTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGGCGTGCTCTTTTGAGGAGAAGTAGGATATTGGTGTTGGACGAAGCAACTGCTTCGATTGATAATTCTACTGATCTGATTCTGCAAAAAATCATTAGGGCTGAGTTTGCAGATTGTACGGTGATCACAGTAGCTCATAGGATACCAACTGTGATGGATTGCAGTATGGTTCTTGCTATAAGTGATGGAAAACTGGCGGAGTATGACGAGCCAATGAGCTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAACTCGTCAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCACATTGA 4434 0.3802 MDDFWSMICGDYDCSKNEEKSLCYDLTLLKDPSSCINHVLVIFFDVLVLILIFIMILKSSLRPYWRNQVRYSNLQLVSAITNGFLGILHLSLGVWFLEESLRKTHKAFPLHWWLLELFHGFTWLVVSLTISLRIKQIAKASMWFFSMLIFFVSGILCALSMSYAIESRELSLKVAFDIISFPGAALLLLCTYKRCKCNDTDREIDDDSLCTPLNGEFNETNLTSHVTPFDKAGFFNKIWFWWLNPLMKTSQEKTLQDEDIPNLRESDRAEICYVSFMEQLNKERQCETSYQSSVLWTIISCHRREILVTGFFALLKVLAISSTPLLLNAFILVAEGNESFKYEGYVLSVSLFLIKIIESLSQRQWYFNTRLVGMKVRSLLNAAIYKKILRLSNSARMIHSGGEIMNYMIVDAYRIGEFPFWFHQTWTTILQLCIALVILFRTIGLATLASLAVIVFTVICNYPLAKLQHKYQSKLMVAQDERLKASSEALVNMKVLKLYAWEKHFKNVVDFLRNAELKLLYAVQLRRTYNTFLFWTSPMLVSTASFLACYFLNVPLNASNVFTFVATVRLVQEPITSIPDVIAVVIQAKVAFARIVNFLDAPELQGEKLKNRCFNDDLKGSISIKSANFSWEGNVSKPTLRSINLEVRHGQKVAICGEVGSGKSTLLATILGEVPKTQGNIDVYGRFAYVSQTAWIQTGTIRENILFGSELEDQRYQETLQRSSLVKDFELLPYGDLTQIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFNEYIMEGLKGKTVLLVTHQVDFLPAFDSVLLMSDGVILQAGPYNELLTSSKEFNDLVNAHKETAGSNQQLVDVTSSKQYSTTRNVKQDLVEKQFKETNGNQLIKQEEREKGDAGLKPYLQYLNQMKGYIFFSMASLCHILFVTCQILQNSWMAANVDNPLVSTLKLILVYFLIGAISTVFLFTRSLLVVALGLQSSKYLFSQLMNSLFRAPMSFYDSTPLGRILSRVSSDMSITDLDIPFSLTFAVGGTIVFYSSLTVLAVVTWQVLIVAIPMVYVAIRMQRYYFTLAKEVMRINGTTKSSLANHVAETVAGATTIRAFEEEDRSFEKNLGLIDINASAFFHSFASNEWLIQRLETISAVVLTAAALCMVMLPPGTFTSGIIGMALSYGLSLNNALVFSIQNQCTLANYIISVERLNQYMHIQSEAEEIVEGNRPPMNWPDAGKVEINDLKIRYRSDGPLVLHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGVIPQDPTLFDGTVRYNLDPLSQHTDQEIWEVLGKCQLREVVQGKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKIIRAEFADCTVITVAHRIPTVMDCSMVLAISDGKLAEYDEPMSLMKREESLFRKLVKEYWSHFQSAESH* 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0759 1477 Pfam ABC transporter 1248 1396 IPR003439 GO:0005524
Tpr2g0759 1477 Pfam ABC transporter 640 774 IPR003439 GO:0005524
Tpr2g0759 1477 Gene3D - 600 870 IPR027417 -
Tpr2g0759 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0759 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 845 IPR027417 -
Tpr2g0759 1477 CDD ABCC_MRP_domain2 1229 1449 - -
Tpr2g0759 1477 Gene3D ABC transporter type 1, transmembrane domain 277 599 IPR036640 GO:0005524|GO:0016021
Tpr2g0759 1477 Gene3D ABC transporter type 1, transmembrane domain 878 1213 IPR036640 GO:0005524|GO:0016021
Tpr2g0759 1477 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Tpr2g0759 1477 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0759 1477 Pfam ABC transporter transmembrane region 931 1176 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0759 1477 SMART AAA_5 649 822 IPR003593 -
Tpr2g0759 1477 SMART AAA_5 1257 1449 IPR003593 -
Tpr2g0759 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 845 IPR003439 GO:0005524
Tpr2g0759 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1231 1465 IPR003439 GO:0005524
Tpr2g0759 1477 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 68 1477 - -
Tpr2g0759 1477 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 68 1477 - -
Tpr2g0759 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1221 1464 IPR027417 -
Tpr2g0759 1477 CDD ABC_6TM_ABCC_D2 922 1206 IPR044726 GO:0140359
Tpr2g0759 1477 Gene3D - 1215 1466 IPR027417 -
Tpr2g0759 1477 CDD ABCC_MRP_domain1 622 821 - -
Tpr2g0759 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1194 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr2g0759 1477 SUPERFAMILY ABC transporter transmembrane region 903 1213 IPR036640 GO:0005524|GO:0016021
Tpr2g0759 1477 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524
Tpr2g0759 1477 SUPERFAMILY ABC transporter transmembrane region 295 602 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0759 Tpr-Chr2 9148063 9157213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0759 573 874 Calmodulin-binding Proteins AT2G36910 28.660 4.96e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0759 K05666 - gmx:100787314 2255.71