LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g0746	ATGATGTCCAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTTCCGGCAATGGGGTCGGGATCGGGGAGGGAGTTTAAAGAACGAAGGCGGATGCCGAGGGTTATGAGTGTCCCAGGGATTGTTTCCGAGCTGGATGATGATCAGGCAGTAAGTGTGTCTTCTGATAATCCGTCAACTATTTCTACTGATCGAATTATCATTGTAGCAAATCAGCTTCCTTTGAAAGCAAAGAGAAGAGATGACAACAAAGGGTGGAGTTTTAGTTGGAACGAGGATTCCTTGCTCTTACAGCTTAAGGATGGATTTCCGGAAGAGATGGAGGTTCTTTATGTTGGGTCACTACGCATTGATGTTGATCCCGCTGAACAAGATGATGTATCACAGTATTTATTGGATAAATTCAAATGTGTTCCTACTTTTCTGCCTCCTGAAACTTTATCAAAATTTTATGATGGCTTTTGCAAAAGACAATTATGGCCACTTTTTCATTACAAGTTACCGTTTTCGACTGATAAAAGCCACCGTTTTGATCGCACATTGTGGGAAGCCTATGTTCTGGCAAACAAGCTCTTCTTTCAAAAGGTAGTAGAAATAATAAACCCGGAGGATGATTATATTTGGGTTCACGATTACCATTTAATGGTGCTGCCAACTTTTCTAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCATCAGAGATATATCGGACTCTTCCTGTCAGGGAAGAGATAATGAAAGCTTTACTCAATTCTGATATCATTGGATTCCATACTTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTAGAGTATCAGTCAAAGAGGGGCTATCTAGGATTGGAATATTATGGGAGGACTATCAGTATCAAGATCATGCCTGTTGGGATTCAGCTGGGTCGGATTGAATCTGTTATGAGAATGGCGGATGAAGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATTTTGCTTGGTATTGATGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAAACAACACCCCAAATGGCAAGGAAGGGCTGTTTTAGTCCAGATAGTTAATCCTGCTAGAGGTAGAGGGATACATGTAGATGAAATACATACTGAAATAGAAGAAAGCTGCAGAAGGATCAACAGAGTGTATGGACGACCTGGTTATGAACCTATTGTTTTTATTGATAGGTCGGTTCCAATTACTGAAAAAGTTGCCTTTTACAGCCTTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATAGTTTGTAGACAGGGAATATCTGGTTCCGAATCAAGTTCCAATGTGAATAACCCAAAGAAGAGCATGCTTGTCATATCAGAATTTATCGGGTGTTCTCCATCACTCAGTGGGGCAATCCGTATCAATCCATGGAATGTTGAATCAACTGCAGAGGCAATGAATGAAGCCATTTCAATGGGTGATGATGAGAAGCAGCTGCGGCATGAAAAGCATTATCGGTATGTCAGCACTCATGATGTGGCTTACTGGTCACGTAGTTTTTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGTTTCAGAGTTGTGGCACTTGATCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGTCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAAAACTCCATTAATAAAAGTCCAAGCAACGAGGTCATCTCTATTTTGGAAACTCTCTCTTTAGACCCCAAAAATACAGTTTTCATTGTTAGTGGACGGGGTAGGGATAGCTTAAGTGACTGGTTTACTCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGATACTTTTTGAGGTGGTCTAAGGATGGTGAATGGGAAATTTGTGGTAACTGCTCCGATTTTGGATGGATGCAGATTGCTGAACCTGTAATGAATCTATATACAGAGGCAACTGATGGTTCCAGCATCGAACGAAAGGAAAGTGCTTTGGTCTGGCAATACAGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGCGTTTTGGCCAATGAGCCTGTTTCTGCAAAGAGTGGCCAGTTTATTGTTGAAGTGAAGCCTCAGGATGTGAGCAAAGGCTTAGTTGCAGAGAAGATATTTTCGTCATTGACCGAGAGCGGCAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGAAATATTCTTTCTTCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAGCCAAGCAAAGCTAAGTATTATCTAGATGATACGTATGAAGTAATAAACATGCTAGAATCTTTGGCTGAAGAATCAGATTCTTCACCCTGCATAGAAGAATCTAGGGATTCCTCTTAG	2586	0.4107	MMSRSYTNLLDLASGNFPAMGSGSGREFKERRRMPRVMSVPGIVSELDDDQAVSVSSDNPSTISTDRIIIVANQLPLKAKRRDDNKGWSFSWNEDSLLLQLKDGFPEEMEVLYVGSLRIDVDPAEQDDVSQYLLDKFKCVPTFLPPETLSKFYDGFCKRQLWPLFHYKLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEIMKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIQLGRIESVMRMADEECKVRELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGRGIHVDEIHTEIEESCRRINRVYGRPGYEPIVFIDRSVPITEKVAFYSLAECVIVTAVRDGMNLTPYEYIVCRQGISGSESSSNVNNPKKSMLVISEFIGCSPSLSGAIRINPWNVESTAEAMNEAISMGDDEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRSKSRAILLDYDGTVMPQNSINKSPSNEVISILETLSLDPKNTVFIVSGRGRDSLSDWFTPCKKLGIAAEHGYFLRWSKDGEWEICGNCSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVSAKSGQFIVEVKPQDVSKGLVAEKIFSSLTESGKQADFVLCVGDDRSDEDMFEIVSSAISRNILSSNASVFACTVGQKPSKAKYYLDDTYEVINMLESLAEESDSSPCIEESRDSS*	862

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g0746	861	Pfam	Trehalose-phosphatase	600	833	IPR003337	GO:0003824\|GO:0005992
	Tpr2g0746	861	Gene3D	Glycogen Phosphorylase B;	321	534	-	-
	Tpr2g0746	861	Gene3D	Glycogen Phosphorylase B;	60	320	-	-
	Tpr2g0746	861	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	66	554	-	-
	Tpr2g0746	861	Gene3D	-	726	856	IPR023214	-
	Tpr2g0746	861	Gene3D	-	596	695	IPR023214	-
	Tpr2g0746	861	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	599	803	IPR006379	-
	Tpr2g0746	861	Pfam	Glycosyltransferase family 20	67	550	IPR001830	GO:0003824\|GO:0005992
	Tpr2g0746	861	TIGRFAM	T6PP: trehalose-phosphatase	594	845	IPR003337	GO:0003824\|GO:0005992
	Tpr2g0746	861	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	858	IPR001830	GO:0003824\|GO:0005992
	Tpr2g0746	861	SUPERFAMILY	HAD-like	597	845	IPR036412	-
	Tpr2g0746	861	CDD	GT20_TPS	67	550	IPR001830	GO:0003824\|GO:0005992
	Tpr2g0746	861	CDD	HAD_TPP	598	839	-	-
	Tpr2g0746	861	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED	1	858	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g0746	Tpr-Chr2	8957465	8967574	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g0746	1	851	Trehalose Biosynthesis Gene Families	AT1G06410	76.733	0.0	1368

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g0746	K16055		-	gmx:100800847	1590.47