Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0740 ATGGCTCAATTGCCACCAAAGGTTCCAATTCCAAACATGACACCAACTTGGCCTGAATTTTCTTCACACCAAAAATTACCTACCCTTAAAACCTTATTGTCACCAAATGCTTCAAACTTTCAAAACAATCAACAAAATCCTTCATGGGTGGACGAGTTTCTAGACTTCTCATCCGCCAGACGAGGAGTCCACAGACGGTCTGCGAGCGACTCCGTCACCTTCATAGAGACATCAATGATGGAGCATTGTCGCCGTAGAGACGGTGACAATGAGTTTGAAAGGTTTGATGATGAACAATTGATGTCTATGTTTTGTGTGGACGAGGTTTCGGGGAAAAACATGATGCCGCCACCATCAGCAACAGCTGCATTGTCTTCTAACTCTAACCCTTCAACTCCTTCTGATCATAACAGCATCAATGATGACAAAGAAGAGGAGGAAGATGAGGAAAAACAACAACAATTGAAGCATGAATTTGATGAGGATGAAATTAGTGAAGGCAAACAAGAAACTGCACGTATTGTCAATGATGATGATGACGACGACAATAATGCAAATCGAACAAATTTTTCAAGTCAGAAAATTACTGACCCCAAGAGGGTTAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCAAGAGTGAGGAAGTTACAATACATATCAGAACTTGAACGAAGTGTGTCTTCATTACAGGCTGAGGTATCAGTACTGTCACCAAGAGTTGCATATTTGGATCATCAGAGATTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCACTTGCCCAAGACAAAATCTTCAAAGATGCTCATCAAGAAGCATTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAACAAAACAACATCAAGAACAATAATAATGCTACAGTAGTATCACCATCTCCATCACCTAAACCACATTGTGATAATGATACTCACATTGAAAATGAACATCTTATCAATGTTTGA 996 0.3996 MAQLPPKVPIPNMTPTWPEFSSHQKLPTLKTLLSPNASNFQNNQQNPSWVDEFLDFSSARRGVHRRSASDSVTFIETSMMEHCRRRDGDNEFERFDDEQLMSMFCVDEVSGKNMMPPPSATAALSSNSNPSTPSDHNSINDDKEEEEDEEKQQQLKHEFDEDEISEGKQETARIVNDDDDDDNNANRTNFSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVSSLQAEVSVLSPRVAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNNIKNNNNATVVSPSPSPKPHCDNDTHIENEHLINV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0740 331 Coils Coil 278 298 - -
Tpr2g0740 331 MobiDBLite consensus disorder prediction 149 185 - -
Tpr2g0740 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Tpr2g0740 331 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 326 - -
Tpr2g0740 331 MobiDBLite consensus disorder prediction 301 321 - -
Tpr2g0740 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 249 IPR004827 GO:0003700|GO:0006355
Tpr2g0740 331 Pfam bZIP transcription factor 199 245 IPR004827 GO:0003700|GO:0006355
Tpr2g0740 331 PANTHER BASIC LEUCINE ZIPPER 34 1 326 - -
Tpr2g0740 331 MobiDBLite consensus disorder prediction 1 21 - -
Tpr2g0740 331 Gene3D - 198 297 - -
Tpr2g0740 331 MobiDBLite consensus disorder prediction 301 315 - -
Tpr2g0740 331 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Tpr2g0740 331 SUPERFAMILY Leucine zipper domain 199 253 IPR046347 GO:0003700|GO:0006355
Tpr2g0740 331 Coils Coil 136 163 - -
Tpr2g0740 331 MobiDBLite consensus disorder prediction 115 196 - -
Tpr2g0740 331 MobiDBLite consensus disorder prediction 119 136 - -
Tpr2g0740 331 CDD bZIP_plant_RF2 200 250 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0740 Tpr-Chr2 8856513 8860620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0740 1 276 bZIP Transcription Factor Family AT3G58120 53.242 1.24e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr2g0740 bZIP_1 3.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0740 - - gmx:100101873 389.037