Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0730 ATGGAGTTTGAAGCTGCGGTTGCAAGAAAACCTGGTGAAACATTGGCTATAGAAGAGATCATAGTGGCCCCACCAATGTCTCGTGAGGAATATCCTGGCATTTTCCCAAGAATTTTGGGTCATGAAGCAACTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACCGAAGTTACCAAAGGAGATACAGTTATTCCAATTTTCCTACCGGATTGCGGGGAGTGTATAGATTGCAAATCAAACAAGAGTAACTGTTGTACTAATTTCCCATTCAAGGTGTCTCCTTGGATGCCTAGACATGAGAGCACTAGATTCACAGATCTAAACGGAGAGATCATATACCATTTCATGTTTGTTTCAAGTTTCAGCGAGTACACTGTGGTCGACATTTCCAATGTAACAAAGATTTATCCACAAATCCCTCCTGATAGGGCTTGTCTTCTCAGTTGTGGTATTTCAACAGGGGTAGGTGCTGCTTGGAGAACAGCAAGTGTGGAGCCAGGATCTACAGTTGCTATTTTTGGGCTGGGATCTGTTGGATTGGCAGTTGCAGAGGGAGCTAGGGTTTGTGGAGCAACTAGAATTATTGGTGTAGATGTCAACCCTGAAAAATTTGAAATTGGTAATGCATTGTTTGCTCAATAA 642 0.4283 MEFEAAVARKPGETLAIEEIIVAPPMSREEYPGIFPRILGHEATGVVESVGKDVTEVTKGDTVIPIFLPDCGECIDCKSNKSNCCTNFPFKVSPWMPRHESTRFTDLNGEIIYHFMFVSSFSEYTVVDISNVTKIYPQIPPDRACLLSCGISTGVGAAWRTASVEPGSTVAIFGLGSVGLAVAEGARVCGATRIIGVDVNPEKFEIGNALFAQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0730 213 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 40 54 IPR002328 GO:0008270|GO:0016491
Tpr2g0730 213 PANTHER ALCOHOL DEHYDROGENASE 4 208 - -
Tpr2g0730 213 SUPERFAMILY GroES-like 1 162 IPR011032 -
Tpr2g0730 213 Gene3D - 29 153 - -
Tpr2g0730 213 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 139 209 IPR036291 -
Tpr2g0730 213 Pfam Alcohol dehydrogenase GroES-like domain 29 134 IPR013154 -
Tpr2g0730 213 Gene3D - 154 210 - -
Tpr2g0730 213 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0730 Tpr-Chr2 8478513 8482135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0730 26 152 Monolignol Biosynthesis Gene Families AT4G37970 27.907 7.53e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0730 K00121 - gmx:100817521 341.658